Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZWU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZWU entry

There is 1 chain in PDB entry 5ZWU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PRO 341
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5ZWU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 47Right-handed alpha
Helix 2
AA2
A
54 58Right-handed 310
Helix 3
AA3
A
100 107Right-handed 310
Helix 4
AA4
A
116 123Right-handed alpha
Helix 5
AA5
A
124 138Right-handed alpha
Helix 6
AA6
A
140 163Right-handed alpha
Helix 7
AA7
A
168 205Right-handed alpha
Helix 8
AA8
A
220 228Right-handed alpha
Helix 9
AA9
A
228 236Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
256 260Right-handed alpha
Helix 12
AB3
A
261 285Right-handed alpha
Helix 13
AB4
A
300 312Right-handed alpha
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There are 3 sheets in PDB entry 5ZWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 9first strand
Strand 2
A
66 74anti-parallel
Strand 3
A
77 86anti-parallel
Strand 4
A
89 94anti-parallel
Strand 5
A
97 98anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
289 292parallel
Strand 3
A
316 320parallel
Strand 4
A
24 29parallel
Strand 5
A
330 334parallel
Strand 6
A
337 339anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
209 214first strand
Strand 2
A
246 251anti-parallel
Strand 3
A
254 255anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il