Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZWX entry

There are 6 chains in PDB entry 5ZWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 26ILE 173
P
 ALA 1ARG 8
P
 SER 10SER 10
B
 ARG 26ILE 173
Q
 ALA 1ARG 8
Q
 SER 10SER 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 5ZWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 49Right-handed 310
Helix 2
AA2
A
92 94Right-handed 310
Helix 3
AA3
A
104 110Right-handed alpha
Helix 4
AA4
P
3 8Right-handed alpha
Helix 5
AA5
B
45 49Right-handed 310
Helix 6
AA6
B
92 94Right-handed 310
Helix 7
AA7
B
105 110Right-handed alpha
Helix 8
AA8
Q
3 8Right-handed alpha
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There are 6 sheets in PDB entry 5ZWX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 91first strand
Strand 2
A
70 78anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
125 135anti-parallel
Strand 5
A
139 144anti-parallel
Strand 6
A
149 154anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
38 41anti-parallel
Strand 3
A
51 59anti-parallel
Strand 4
A
125 135anti-parallel
Strand 5
A
117 122anti-parallel
Strand 6
A
158 160anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
168 170anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
86 91first strand
Strand 2
B
70 78anti-parallel
Strand 3
B
51 59anti-parallel
Strand 4
B
125 135anti-parallel
Strand 5
B
139 144anti-parallel
Strand 6
B
149 154anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
38 41anti-parallel
Strand 3
B
51 59anti-parallel
Strand 4
B
125 135anti-parallel
Strand 5
B
117 122anti-parallel
Strand 6
B
158 160anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 165first strand
Strand 2
B
168 170anti-parallel
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