Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZWY entry

There are 2 chains in PDB entry 5ZWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 3LEU 316
B
 ARG 3MET 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 5ZWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 65Right-handed alpha
Helix 2
AA2
A
78 91Right-handed alpha
Helix 3
AA3
A
126 132Right-handed 310
Helix 4
AA4
A
133 141Right-handed alpha
Helix 5
AA5
A
162 176Right-handed alpha
Helix 6
AA6
A
189 197Right-handed alpha
Helix 7
AA7
A
198 203Right-handed 310
Helix 8
AA8
A
209 218Right-handed alpha
Helix 9
AA9
A
223 237Right-handed alpha
Helix 10
AB1
A
247 249Right-handed 310
Helix 11
AB2
A
275 290Right-handed alpha
Helix 12
AB3
A
293 314Right-handed alpha
Helix 13
AB4
B
53 65Right-handed alpha
Helix 14
AB5
B
78 90Right-handed alpha
Helix 15
AB6
B
126 132Right-handed 310
Helix 16
AB7
B
133 141Right-handed alpha
Helix 17
AB8
B
162 176Right-handed alpha
Helix 18
AB9
B
189 197Right-handed alpha
Helix 19
AC1
B
198 203Right-handed 310
Helix 20
AC2
B
209 218Right-handed alpha
Helix 21
AC3
B
224 237Right-handed alpha
Helix 22
AC4
B
247 249Right-handed 310
Helix 23
AC5
B
275 290Right-handed alpha
Helix 24
AC6
B
293 310Right-handed alpha
Helix 25
AC7
B
313 318Right-handed 310
Helix 26
AC8
B
320 324Right-handed 310
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There are 6 sheets in PDB entry 5ZWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
69 76parallel
Strand 3
A
98 101parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
69 76parallel
Strand 3
A
18 21parallel
Strand 4
A
154 157parallel
Strand 5
A
179 182parallel
Strand 6
A
205 206parallel
Strand 7
A
241 245parallel
Strand 8
A
251 254anti-parallel
Strand 9
A
261 263anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
25 31anti-parallel
Strand 3
A
108 114parallel
Strand 4
A
119 125anti-parallel
Strand 5
B
41 43parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 43first strand
Strand 2
B
120 125parallel
Strand 3
B
108 114anti-parallel
Strand 4
B
25 32parallel
Strand 5
B
46 52anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
69 76parallel
Strand 3
B
98 101parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
69 76parallel
Strand 3
B
18 21parallel
Strand 4
B
154 157parallel
Strand 5
B
179 182parallel
Strand 6
B
205 206parallel
Strand 7
B
241 245parallel
Strand 8
B
251 254anti-parallel
Strand 9
B
261 263anti-parallel
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