Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZX5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZX5 entry

There are 4 chains in PDB entry 5ZX5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TRP 6	SER 1230
B	TRP 6	SER 1230
C	TRP 6	SER 1230
D	TRP 6	SER 1230

There are172 helices in PDB entry 5ZX5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	17	Right-handed alpha
Helix 2	AA2	A	152	165	Right-handed alpha
Helix 3	AA3	A	262	272	Right-handed alpha
Helix 4	AA4	A	290	292	Right-handed 310
Helix 5	AA5	A	311	315	Right-handed alpha
Helix 6	AA6	A	361	366	Right-handed alpha
Helix 7	AA7	A	391	399	Right-handed alpha
Helix 8	AA8	A	400	403	Right-handed 310
Helix 9	AA9	A	406	417	Right-handed alpha
Helix 10	AB1	A	419	428	Right-handed alpha
Helix 11	AB2	A	438	449	Right-handed alpha
Helix 12	AB3	A	451	462	Right-handed alpha
Helix 13	AB4	A	471	476	Right-handed alpha
Helix 14	AB5	A	488	494	Right-handed alpha
Helix 15	AB6	A	508	520	Right-handed alpha
Helix 16	AB7	A	526	529	Right-handed 310
Helix 17	AB8	A	530	537	Right-handed alpha
Helix 18	AB9	A	621	632	Right-handed alpha
Helix 19	AC1	A	634	643	Right-handed alpha
Helix 20	AC2	A	647	668	Right-handed alpha
Helix 21	AC3	A	675	680	Right-handed alpha
Helix 22	AC4	A	682	701	Right-handed alpha
Helix 23	AC5	A	701	709	Right-handed alpha
Helix 24	AC6	A	720	728	Right-handed alpha
Helix 25	AC7	A	730	735	Right-handed alpha
Helix 26	AC8	A	736	749	Right-handed alpha
Helix 27	AC9	A	758	767	Right-handed alpha
Helix 28	AD1	A	768	771	Right-handed 310
Helix 29	AD2	A	842	850	Right-handed alpha
Helix 30	AD3	A	851	876	Right-handed alpha
Helix 31	AD4	A	883	906	Right-handed alpha
Helix 32	AD5	A	916	920	Right-handed alpha
Helix 33	AD6	A	922	944	Right-handed alpha
Helix 34	AD7	A	955	967	Right-handed alpha
Helix 35	AD8	A	968	981	Right-handed alpha
Helix 36	AD9	A	986	998	Right-handed alpha
Helix 37	AE1	A	1000	1023	Right-handed alpha
Helix 38	AE2	A	1030	1042	Right-handed alpha
Helix 39	AE3	A	1072	1087	Right-handed alpha
Helix 40	AE4	A	1087	1123	Right-handed alpha
Helix 41	AE5	A	1163	1185	Right-handed alpha
Helix 42	AE6	A	1186	1188	Right-handed 310
Helix 43	AE7	A	1192	1228	Right-handed alpha
Helix 44	AE8	B	7	17	Right-handed alpha
Helix 45	AE9	B	152	165	Right-handed alpha
Helix 46	AF1	B	262	272	Right-handed alpha
Helix 47	AF2	B	290	292	Right-handed 310
Helix 48	AF3	B	311	315	Right-handed alpha
Helix 49	AF4	B	361	366	Right-handed alpha
Helix 50	AF5	B	391	399	Right-handed alpha
Helix 51	AF6	B	400	403	Right-handed 310
Helix 52	AF7	B	406	417	Right-handed alpha
Helix 53	AF8	B	419	428	Right-handed alpha
Helix 54	AF9	B	438	449	Right-handed alpha
Helix 55	AG1	B	451	462	Right-handed alpha
Helix 56	AG2	B	471	476	Right-handed alpha
Helix 57	AG3	B	488	494	Right-handed alpha
Helix 58	AG4	B	508	520	Right-handed alpha
Helix 59	AG5	B	526	529	Right-handed 310
Helix 60	AG6	B	530	537	Right-handed alpha
Helix 61	AG7	B	621	632	Right-handed alpha
Helix 62	AG8	B	634	643	Right-handed alpha
Helix 63	AG9	B	647	668	Right-handed alpha
Helix 64	AH1	B	675	680	Right-handed alpha
Helix 65	AH2	B	682	701	Right-handed alpha
Helix 66	AH3	B	701	709	Right-handed alpha
Helix 67	AH4	B	720	728	Right-handed alpha
Helix 68	AH5	B	730	735	Right-handed alpha
Helix 69	AH6	B	736	749	Right-handed alpha
Helix 70	AH7	B	758	767	Right-handed alpha
Helix 71	AH8	B	768	771	Right-handed 310
Helix 72	AH9	B	842	850	Right-handed alpha
Helix 73	AI1	B	851	876	Right-handed alpha
Helix 74	AI2	B	883	906	Right-handed alpha
Helix 75	AI3	B	916	920	Right-handed alpha
Helix 76	AI4	B	922	944	Right-handed alpha
Helix 77	AI5	B	955	967	Right-handed alpha
Helix 78	AI6	B	968	981	Right-handed alpha
Helix 79	AI7	B	986	998	Right-handed alpha
Helix 80	AI8	B	1000	1023	Right-handed alpha
Helix 81	AI9	B	1030	1042	Right-handed alpha
Helix 82	AJ1	B	1072	1087	Right-handed alpha
Helix 83	AJ2	B	1087	1123	Right-handed alpha
Helix 84	AJ3	B	1163	1185	Right-handed alpha
Helix 85	AJ4	B	1186	1188	Right-handed 310
Helix 86	AJ5	B	1192	1228	Right-handed alpha
Helix 87	AJ6	C	7	17	Right-handed alpha
Helix 88	AJ7	C	152	165	Right-handed alpha
Helix 89	AJ8	C	262	272	Right-handed alpha
Helix 90	AJ9	C	290	292	Right-handed 310
Helix 91	AK1	C	311	315	Right-handed alpha
Helix 92	AK2	C	361	366	Right-handed alpha
Helix 93	AK3	C	391	399	Right-handed alpha
Helix 94	AK4	C	400	403	Right-handed 310
Helix 95	AK5	C	406	417	Right-handed alpha
Helix 96	AK6	C	419	428	Right-handed alpha
Helix 97	AK7	C	438	449	Right-handed alpha
Helix 98	AK8	C	451	462	Right-handed alpha
Helix 99	AK9	C	471	476	Right-handed alpha
Helix 100	AL1	C	488	494	Right-handed alpha
Helix 101	AL2	C	508	520	Right-handed alpha
Helix 102	AL3	C	526	529	Right-handed 310
Helix 103	AL4	C	530	537	Right-handed alpha
Helix 104	AL5	C	621	632	Right-handed alpha
Helix 105	AL6	C	634	643	Right-handed alpha
Helix 106	AL7	C	647	668	Right-handed alpha
Helix 107	AL8	C	675	680	Right-handed alpha
Helix 108	AL9	C	682	701	Right-handed alpha
Helix 109	AM1	C	701	709	Right-handed alpha
Helix 110	AM2	C	720	728	Right-handed alpha
Helix 111	AM3	C	730	735	Right-handed alpha
Helix 112	AM4	C	736	749	Right-handed alpha
Helix 113	AM5	C	758	767	Right-handed alpha
Helix 114	AM6	C	768	771	Right-handed 310
Helix 115	AM7	C	842	850	Right-handed alpha
Helix 116	AM8	C	851	876	Right-handed alpha
Helix 117	AM9	C	883	906	Right-handed alpha
Helix 118	AN1	C	916	920	Right-handed alpha
Helix 119	AN2	C	922	944	Right-handed alpha
Helix 120	AN3	C	955	967	Right-handed alpha
Helix 121	AN4	C	968	981	Right-handed alpha
Helix 122	AN5	C	986	998	Right-handed alpha
Helix 123	AN6	C	1000	1023	Right-handed alpha
Helix 124	AN7	C	1030	1042	Right-handed alpha
Helix 125	AN8	C	1072	1087	Right-handed alpha
Helix 126	AN9	C	1087	1123	Right-handed alpha
Helix 127	AO1	C	1163	1185	Right-handed alpha
Helix 128	AO2	C	1186	1188	Right-handed 310
Helix 129	AO3	C	1192	1228	Right-handed alpha
Helix 130	AO4	D	7	17	Right-handed alpha
Helix 131	AO5	D	152	165	Right-handed alpha
Helix 132	AO6	D	262	272	Right-handed alpha
Helix 133	AO7	D	290	292	Right-handed 310
Helix 134	AO8	D	311	315	Right-handed alpha
Helix 135	AO9	D	361	366	Right-handed alpha
Helix 136	AP1	D	391	399	Right-handed alpha
Helix 137	AP2	D	400	403	Right-handed 310
Helix 138	AP3	D	406	417	Right-handed alpha
Helix 139	AP4	D	419	428	Right-handed alpha
Helix 140	AP5	D	438	449	Right-handed alpha
Helix 141	AP6	D	451	462	Right-handed alpha
Helix 142	AP7	D	471	476	Right-handed alpha
Helix 143	AP8	D	488	494	Right-handed alpha
Helix 144	AP9	D	508	520	Right-handed alpha
Helix 145	AQ1	D	526	529	Right-handed 310
Helix 146	AQ2	D	530	537	Right-handed alpha
Helix 147	AQ3	D	621	632	Right-handed alpha
Helix 148	AQ4	D	634	643	Right-handed alpha
Helix 149	AQ5	D	647	668	Right-handed alpha
Helix 150	AQ6	D	675	680	Right-handed alpha
Helix 151	AQ7	D	682	701	Right-handed alpha
Helix 152	AQ8	D	701	711	Right-handed alpha
Helix 153	AQ9	D	720	728	Right-handed alpha
Helix 154	AR1	D	730	735	Right-handed alpha
Helix 155	AR2	D	736	749	Right-handed alpha
Helix 156	AR3	D	758	767	Right-handed alpha
Helix 157	AR4	D	768	771	Right-handed 310
Helix 158	AR5	D	842	850	Right-handed alpha
Helix 159	AR6	D	851	876	Right-handed alpha
Helix 160	AR7	D	883	906	Right-handed alpha
Helix 161	AR8	D	916	920	Right-handed alpha
Helix 162	AR9	D	922	944	Right-handed alpha
Helix 163	AS1	D	955	967	Right-handed alpha
Helix 164	AS2	D	968	981	Right-handed alpha
Helix 165	AS3	D	986	998	Right-handed alpha
Helix 166	AS4	D	1000	1023	Right-handed alpha
Helix 167	AS5	D	1030	1042	Right-handed alpha
Helix 168	AS6	D	1072	1087	Right-handed alpha
Helix 169	AS7	D	1087	1123	Right-handed alpha
Helix 170	AS8	D	1163	1185	Right-handed alpha
Helix 171	AS9	D	1186	1188	Right-handed 310
Helix 172	AT1	D	1192	1228	Right-handed alpha

There are 8 sheets in PDB entry 5ZX5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	55	first strand
Strand 2	A	64	66	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	287	288	first strand
Strand 2	A	373	374	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	55	first strand
Strand 2	B	64	66	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	287	288	first strand
Strand 2	B	373	374	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	55	first strand
Strand 2	C	64	66	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	287	288	first strand
Strand 2	C	373	374	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	64	66	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	288	first strand
Strand 2	D	373	374	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZX5

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZX5