Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZY6 entry

There are 2 chains in PDB entry 5ZY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10LYS 264
B
 GLU 10ALA 263
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5ZY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 21Right-handed alpha
Helix 2
AA2
A
23 31Right-handed alpha
Helix 3
AA3
A
33 44Right-handed alpha
Helix 4
AA4
A
57 72Right-handed alpha
Helix 5
AA5
A
84 96Right-handed alpha
Helix 6
AA6
A
108 122Right-handed alpha
Helix 7
AA7
A
134 148Right-handed alpha
Helix 8
AA8
A
164 166Right-handed 310
Helix 9
AA9
A
167 178Right-handed alpha
Helix 10
AB1
A
197 204Right-handed alpha
Helix 11
AB2
A
207 218Right-handed alpha
Helix 12
AB3
B
11 21Right-handed alpha
Helix 13
AB4
B
23 31Right-handed alpha
Helix 14
AB5
B
33 44Right-handed alpha
Helix 15
AB6
B
57 72Right-handed alpha
Helix 16
AB7
B
84 96Right-handed alpha
Helix 17
AB8
B
108 122Right-handed alpha
Helix 18
AB9
B
134 149Right-handed alpha
Helix 19
AC1
B
164 166Right-handed 310
Helix 20
AC2
B
167 178Right-handed alpha
Helix 21
AC3
B
197 204Right-handed alpha
Helix 22
AC4
B
207 218Right-handed alpha
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There are 2 sheets in PDB entry 5ZY6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 132first strand
Strand 2
A
101 106parallel
Strand 3
A
75 79parallel
Strand 4
A
158 161parallel
Strand 5
A
186 189parallel
Strand 6
A
254 262anti-parallel
Strand 7
A
232 239anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 132first strand
Strand 2
B
101 106parallel
Strand 3
B
75 79parallel
Strand 4
B
158 161parallel
Strand 5
B
186 189parallel
Strand 6
B
253 262anti-parallel
Strand 7
B
232 240anti-parallel
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