Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZYP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZYP entry

There is 1 chain in PDB entry 5ZYP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 10PRO 1102
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5ZYP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
42 52Right-handed alpha
Helix 2
AA2
A
55 69Right-handed alpha
Helix 3
AA3
A
71 83Right-handed alpha
Helix 4
AA4
A
87 90Right-handed 310
Helix 5
AA5
A
91 107Right-handed alpha
Helix 6
AA6
A
112 134Right-handed alpha
Helix 7
AA7
A
137 151Right-handed alpha
Helix 8
AA8
A
153 175Right-handed alpha
Helix 9
AA9
A
182 196Right-handed alpha
Helix 10
AB1
A
198 213Right-handed alpha
Helix 11
AB2
A
219 231Right-handed alpha
Helix 12
AB3
A
233 248Right-handed alpha
Helix 13
AB4
A
251 263Right-handed alpha
Helix 14
AB5
A
284 288Right-handed alpha
Helix 15
AB6
A
290 295Right-handed alpha
Helix 16
AB7
A
300 306Right-handed alpha
Helix 17
AB8
A
1042 1057Right-handed alpha
Helix 18
AB9
A
1067 1071Right-handed 310
Helix 19
AC1
A
1073 1078Right-handed alpha
Helix 20
AC2
A
1080 1085Right-handed 310
Helix 21
AC3
A
1092 1097Right-handed alpha
Helix 22
AC4
A
1098 1100Right-handed 310
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There is 1 sheet (AA1) in PDB entry 5ZYP.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 22first strand
Strand 2
A
29 33anti-parallel
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