Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZZ7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZZ7 entry

There are 2 chains in PDB entry 5ZZ7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3SER 208
B
 PRO 6SER 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5ZZ7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 26Right-handed alpha
Helix 2
AA2
A
32 41Right-handed alpha
Helix 3
AA3
A
43 52Right-handed alpha
Helix 4
AA4
A
53 57Right-handed 310
Helix 5
AA5
A
66 77Right-handed alpha
Helix 6
AA6
A
91 99Right-handed alpha
Helix 7
AA7
A
100 106Right-handed alpha
Helix 8
AA8
A
133 135Right-handed 310
Helix 9
AA9
A
136 145Right-handed alpha
Helix 10
AB1
A
154 156Right-handed 310
Helix 11
AB2
A
157 169Right-handed alpha
Helix 12
AB3
A
191 208Right-handed alpha
Helix 13
AB4
B
7 26Right-handed alpha
Helix 14
AB5
B
32 41Right-handed alpha
Helix 15
AB6
B
43 52Right-handed alpha
Helix 16
AB7
B
53 57Right-handed 310
Helix 17
AB8
B
66 78Right-handed alpha
Helix 18
AB9
B
91 99Right-handed alpha
Helix 19
AC1
B
100 106Right-handed alpha
Helix 20
AC2
B
136 145Right-handed alpha
Helix 21
AC3
B
154 156Right-handed 310
Helix 22
AC4
B
157 168Right-handed alpha
Helix 23
AC5
B
191 208Right-handed alpha
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There are 4 sheets in PDB entry 5ZZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
63 65anti-parallel
Strand 3
A
59 60anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
108 114parallel
Strand 3
A
83 88parallel
Strand 4
A
148 151parallel
Strand 5
A
172 175parallel
Strand 6
A
187 189parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 31first strand
Strand 2
B
63 65anti-parallel
Strand 3
B
59 60anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
129 133anti-parallel
Strand 3
B
108 115parallel
Strand 4
B
83 88parallel
Strand 5
B
148 151parallel
Strand 6
B
172 175parallel
Strand 7
B
187 189parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il