Analysis of interatomic Contacts of Structural Units in PDB entry:
6A0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A0W entry

There is 1 chain in PDB entry 6A0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6A0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 54Right-handed alpha
Helix 2
AA2
A
67 74Right-handed alpha
Helix 3
AA3
A
86 89Right-handed 310
Helix 4
AA4
A
112 119Right-handed alpha
Helix 5
AA5
A
137 161Right-handed alpha
Helix 6
AA6
A
172 189Right-handed alpha
Helix 7
AA7
A
209 219Right-handed alpha
Helix 8
AA8
A
232 236Right-handed 310
Helix 9
AA9
A
238 242Right-handed 310
Helix 10
AB1
A
271 276Right-handed 310
Helix 11
AB2
A
281 284Right-handed 310
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There are 4 sheets in PDB entry 6A0W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
8 9anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
258 262anti-parallel
Strand 3
A
248 254anti-parallel
Strand 4
A
223 228parallel
Strand 5
A
197 202parallel
Strand 6
A
165 171parallel
Strand 7
A
102 108parallel
Strand 8
A
90 97anti-parallel
Strand 9
A
78 85anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
134 136anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
290 291anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il