Analysis of interatomic Contacts of Structural Units in PDB entry:
6A16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A16 entry

There is 1 chain in PDB entry 6A16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 36LEU 513
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6A16. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 76Right-handed alpha
Helix 2
AA2
A
93 103Right-handed alpha
Helix 3
AA3
A
113 121Right-handed alpha
Helix 4
AA4
A
130 144Right-handed alpha
Helix 5
AA5
A
145 152Right-handed alpha
Helix 6
AA6
A
152 166Right-handed alpha
Helix 7
AA7
A
176 194Right-handed alpha
Helix 8
AA8
A
199 215Right-handed alpha
Helix 9
AA9
A
216 218Right-handed 310
Helix 10
AB1
A
226 258Right-handed alpha
Helix 11
AB2
A
285 294Right-handed alpha
Helix 12
AB3
A
297 329Right-handed alpha
Helix 13
AB4
A
330 351Right-handed alpha
Helix 14
AB5
A
357 363Right-handed alpha
Helix 15
AB6
A
364 379Right-handed alpha
Helix 16
AB7
A
409 415Right-handed 310
Helix 17
AB8
A
426 432Right-handed 310
Helix 18
AB9
A
457 461Right-handed 310
Helix 19
AC1
A
464 482Right-handed alpha
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There are 3 sheets in PDB entry 6A16. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 83first strand
Strand 2
A
86 91anti-parallel
Strand 3
A
404 407parallel
Strand 4
A
386 388anti-parallel
Strand 5
A
108 110anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 175first strand
Strand 2
A
506 511anti-parallel
Strand 3
A
483 487anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
397 399anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il