Analysis of interatomic Contacts of Structural Units in PDB entry:
6A2F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A2F entry

There are 4 chains in PDB entry 6A2F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 33
A
 ALA 35HIS 358
B
 MET 1VAL 33
B
 ALA 35HIS 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6A2F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 23Right-handed alpha
Helix 2
AA2
A
33 39Right-handed alpha
Helix 3
AA3
A
41 49Right-handed alpha
Helix 4
AA4
A
60 71Right-handed alpha
Helix 5
AA5
A
86 94Right-handed alpha
Helix 6
AA6
A
102 113Right-handed alpha
Helix 7
AA7
A
134 146Right-handed alpha
Helix 8
AA8
A
168 180Right-handed alpha
Helix 9
AA9
A
193 200Right-handed alpha
Helix 10
AB1
A
201 204Right-handed 310
Helix 11
AB2
A
211 216Right-handed 310
Helix 12
AB3
A
253 257Right-handed 310
Helix 13
AB4
A
272 276Right-handed 310
Helix 14
AB5
A
329 337Right-handed alpha
Helix 15
AB6
A
340 347Right-handed alpha
Helix 16
AB7
B
10 23Right-handed alpha
Helix 17
AB8
B
33 39Right-handed alpha
Helix 18
AB9
B
41 49Right-handed alpha
Helix 19
AC1
B
60 71Right-handed alpha
Helix 20
AC2
B
86 94Right-handed alpha
Helix 21
AC3
B
102 113Right-handed alpha
Helix 22
AC4
B
134 146Right-handed alpha
Helix 23
AC5
B
168 180Right-handed alpha
Helix 24
AC6
B
193 200Right-handed alpha
Helix 25
AC7
B
201 204Right-handed 310
Helix 26
AC8
B
211 216Right-handed 310
Helix 27
AC9
B
224 229Right-handed alpha
Helix 28
AD1
B
253 257Right-handed 310
Helix 29
AD2
B
272 276Right-handed 310
Helix 30
AD3
B
329 337Right-handed alpha
Helix 31
AD4
B
340 347Right-handed alpha
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There are 8 sheets in PDB entry 6A2F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 356first strand
Strand 2
A
4 8parallel
Strand 3
A
234 246anti-parallel
Strand 4
A
320 324anti-parallel
Strand 5
A
286 289anti-parallel
Strand 6
A
292 296anti-parallel
Strand 7
A
305 308anti-parallel
Strand 8
A
264 269anti-parallel
Strand 9
A
234 246anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 78first strand
Strand 2
A
55 58parallel
Strand 3
A
28 32parallel
Strand 4
A
207 208parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
118 123parallel
Strand 3
A
151 157parallel
Strand 4
A
189 190parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 252first strand
Strand 2
A
258 259anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
354 357first strand
Strand 2
B
5 9parallel
Strand 3
B
234 246anti-parallel
Strand 4
B
320 324anti-parallel
Strand 5
B
286 289anti-parallel
Strand 6
B
292 296anti-parallel
Strand 7
B
305 308anti-parallel
Strand 8
B
264 269anti-parallel
Strand 9
B
234 246anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 78first strand
Strand 2
B
55 58parallel
Strand 3
B
28 32parallel
Strand 4
B
207 208parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
118 123parallel
Strand 3
B
151 157parallel
Strand 4
B
189 190parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 252first strand
Strand 2
B
258 259anti-parallel
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