Analysis of interatomic Contacts of Structural Units in PDB entry:
6A34


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A34 entry

There are 2 chains in PDB entry 6A34 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 356
B
 MET 1ASN 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6A34. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
43 53Right-handed alpha
Helix 3
AA3
A
58 77Right-handed alpha
Helix 4
AA4
A
81 98Right-handed alpha
Helix 5
AA5
A
103 120Right-handed alpha
Helix 6
AA6
A
124 158Right-handed alpha
Helix 7
AA7
A
170 174Right-handed 310
Helix 8
AA8
A
179 190Right-handed alpha
Helix 9
AA9
A
205 210Right-handed alpha
Helix 10
AB1
A
210 218Right-handed alpha
Helix 11
AB2
A
226 228Right-handed 310
Helix 12
AB3
A
229 236Right-handed alpha
Helix 13
AB4
A
260 271Right-handed alpha
Helix 14
AB5
A
280 282Right-handed 310
Helix 15
AB6
A
290 294Right-handed 310
Helix 16
AB7
A
301 305Right-handed alpha
Helix 17
AB8
A
327 331Right-handed 310
Helix 18
AB9
A
344 355Right-handed alpha
Helix 19
AC1
B
6 11Right-handed alpha
Helix 20
AC2
B
43 53Right-handed alpha
Helix 21
AC3
B
58 77Right-handed alpha
Helix 22
AC4
B
81 98Right-handed alpha
Helix 23
AC5
B
103 119Right-handed alpha
Helix 24
AC6
B
125 158Right-handed alpha
Helix 25
AC7
B
170 174Right-handed 310
Helix 26
AC8
B
179 190Right-handed alpha
Helix 27
AC9
B
205 210Right-handed alpha
Helix 28
AD1
B
210 218Right-handed alpha
Helix 29
AD2
B
226 228Right-handed 310
Helix 30
AD3
B
229 236Right-handed alpha
Helix 31
AD4
B
260 271Right-handed alpha
Helix 32
AD5
B
280 282Right-handed 310
Helix 33
AD6
B
290 294Right-handed 310
Helix 34
AD7
B
301 305Right-handed alpha
Helix 35
AD8
B
327 331Right-handed 310
Helix 36
AD9
B
344 355Right-handed alpha
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There are 8 sheets in PDB entry 6A34. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
23 27anti-parallel
Strand 3
A
38 41anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 225first strand
Strand 2
A
193 199parallel
Strand 3
A
161 165parallel
Strand 4
A
241 244parallel
Strand 5
A
275 278parallel
Strand 6
A
333 336parallel
Strand 7
A
339 341anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
248 250parallel
Strand 3
A
255 258anti-parallel
Strand 4
A
323 326anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 307first strand
Strand 2
A
310 311anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 20first strand
Strand 2
B
23 27anti-parallel
Strand 3
B
38 41anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 225first strand
Strand 2
B
193 199parallel
Strand 3
B
161 165parallel
Strand 4
B
241 244parallel
Strand 5
B
275 278parallel
Strand 6
B
333 336parallel
Strand 7
B
339 341anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
248 250parallel
Strand 3
B
255 258anti-parallel
Strand 4
B
323 326anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
306 307first strand
Strand 2
B
310 311anti-parallel
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