Analysis of interatomic Contacts of Structural Units in PDB entry:
6A41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A41 entry

There is 1 chain in PDB entry 6A41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ALA 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6A41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 28Right-handed alpha
Helix 2
AA2
A
36 40Right-handed 310
Helix 3
AA3
A
41 52Right-handed alpha
Helix 4
AA4
A
62 75Right-handed alpha
Helix 5
AA5
A
97 109Right-handed alpha
Helix 6
AA6
A
109 127Right-handed alpha
Helix 7
AA7
A
138 141Right-handed 310
Helix 8
AA8
A
146 159Right-handed alpha
Helix 9
AA9
A
159 168Right-handed alpha
Helix 10
AB1
A
189 194Right-handed alpha
Helix 11
AB2
A
195 205Right-handed alpha
Helix 12
AB3
A
213 226Right-handed alpha
Helix 13
AB4
A
227 230Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6A41.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
31 34parallel
Strand 3
A
7 10parallel
Strand 4
A
79 83parallel
Strand 5
A
129 136parallel
Strand 6
A
172 179parallel
Strand 7
A
236 239parallel
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