Analysis of interatomic Contacts of Structural Units in PDB entry:
6A47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A47 entry

There are 4 chains in PDB entry 6A47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLY 231
B
 PRO 5ASP 230
C
 C 3 T 23
D
 C 3 T 23
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6A47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 24Right-handed 310
Helix 2
AA2
A
37 42Right-handed alpha
Helix 3
AA3
A
71 79Right-handed alpha
Helix 4
AA4
A
81 88Right-handed alpha
Helix 5
AA5
A
94 107Right-handed alpha
Helix 6
AA6
A
122 133Right-handed alpha
Helix 7
AA7
A
147 158Right-handed alpha
Helix 8
AA8
A
171 181Right-handed alpha
Helix 9
AA9
A
189 204Right-handed alpha
Helix 10
AB1
A
204 216Right-handed alpha
Helix 11
AB2
A
220 222Right-handed 310
Helix 12
AB3
B
20 24Right-handed 310
Helix 13
AB4
B
37 41Right-handed alpha
Helix 14
AB5
B
71 79Right-handed alpha
Helix 15
AB6
B
81 88Right-handed alpha
Helix 16
AB7
B
94 107Right-handed alpha
Helix 17
AB8
B
122 134Right-handed alpha
Helix 18
AB9
B
146 159Right-handed alpha
Helix 19
AC1
B
171 181Right-handed alpha
Helix 20
AC2
B
190 204Right-handed alpha
Helix 21
AC3
B
204 216Right-handed alpha
Helix 22
AC4
B
220 222Right-handed 310
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There are 2 sheets in PDB entry 6A47. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
143 146anti-parallel
Strand 3
A
112 116parallel
Strand 4
A
9 17parallel
Strand 5
A
27 36anti-parallel
Strand 6
A
57 63anti-parallel
Strand 7
B
58 63anti-parallel
Strand 8
B
27 36anti-parallel
Strand 9
B
9 17anti-parallel
Strand 10
B
112 115parallel
Strand 11
B
143 145parallel
Strand 12
B
217 218anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 45first strand
Strand 2
B
51 52anti-parallel
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