Analysis of interatomic Contacts of Structural Units in PDB entry:
6A4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A4V entry

There are 2 chains in PDB entry 6A4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3CYS 280
B
 ASP 3CYS 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6A4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 22Right-handed alpha
Helix 2
AA2
A
26 51Right-handed alpha
Helix 3
AA3
A
54 71Right-handed alpha
Helix 4
AA4
A
72 74Right-handed 310
Helix 5
AA5
A
76 90Right-handed alpha
Helix 6
AA6
A
96 113Right-handed alpha
Helix 7
AA7
A
114 119Right-handed 310
Helix 8
AA8
A
126 135Right-handed alpha
Helix 9
AA9
A
139 151Right-handed alpha
Helix 10
AB1
A
160 171Right-handed alpha
Helix 11
AB2
A
178 202Right-handed alpha
Helix 12
AB3
A
203 228Right-handed alpha
Helix 13
AB4
A
240 255Right-handed alpha
Helix 14
AB5
A
260 280Right-handed alpha
Helix 15
AB6
B
9 24Right-handed alpha
Helix 16
AB7
B
26 52Right-handed alpha
Helix 17
AB8
B
54 71Right-handed alpha
Helix 18
AB9
B
76 93Right-handed alpha
Helix 19
AC1
B
96 113Right-handed alpha
Helix 20
AC2
B
114 119Right-handed 310
Helix 21
AC3
B
126 135Right-handed alpha
Helix 22
AC4
B
138 151Right-handed alpha
Helix 23
AC5
B
160 170Right-handed alpha
Helix 24
AC6
B
178 202Right-handed alpha
Helix 25
AC7
B
203 229Right-handed alpha
Helix 26
AC8
B
239 256Right-handed alpha
Helix 27
AC9
B
260 279Right-handed alpha
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There are 2 sheets in PDB entry 6A4V. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 7first strand
Strand 2
A
158 159anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 7first strand
Strand 2
B
158 159anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il