Analysis of interatomic Contacts of Structural Units in PDB entry:
6A5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A5Y entry

There are 4 chains in PDB entry 6A5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 244VAL 471
B
 HIS 746GLU 755
D
 GLU 228ALA 457
F
 ARG 629SER 641
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6A5Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
246 262Right-handed alpha
Helix 2
AA2
A
266 271Right-handed alpha
Helix 3
AA3
A
271 276Right-handed alpha
Helix 4
AA4
A
279 304Right-handed alpha
Helix 5
AA5
A
307 311Right-handed 310
Helix 6
AA6
A
312 336Right-handed alpha
Helix 7
AA7
A
343 353Right-handed alpha
Helix 8
AA8
A
358 376Right-handed alpha
Helix 9
AA9
A
378 391Right-handed alpha
Helix 10
AB1
A
400 423Right-handed alpha
Helix 11
AB2
A
428 457Right-handed alpha
Helix 12
AB3
A
462 469Right-handed alpha
Helix 13
AB4
B
747 753Right-handed alpha
Helix 14
AB5
D
231 243Right-handed alpha
Helix 15
AB6
D
264 285Right-handed alpha
Helix 16
AB7
D
288 292Right-handed 310
Helix 17
AB8
D
293 317Right-handed alpha
Helix 18
AB9
D
318 320Right-handed 310
Helix 19
AC1
D
334 340Right-handed alpha
Helix 20
AC2
D
342 353Right-handed alpha
Helix 21
AC3
D
353 360Right-handed alpha
Helix 22
AC4
D
363 376Right-handed alpha
Helix 23
AC5
D
385 408Right-handed alpha
Helix 24
AC6
D
413 420Right-handed alpha
Helix 25
AC7
D
420 442Right-handed alpha
Helix 26
AC8
D
448 456Right-handed alpha
Helix 27
AC9
F
630 639Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6A5Y.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
323 325first strand
Strand 2
D
331 333anti-parallel
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