Analysis of interatomic Contacts of Structural Units in PDB entry:
6A5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A5Z entry

There are 8 chains in PDB entry 6A5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 244VAL 471
D
 GLU 228GLU 456
H
 GLU 244ASP 470
L
 MET 230GLU 456
E
 GLU 744PRO 758
F
 HIS 630GLY 640
G
 ARG 745GLU 755
I
 HIS 630GLN 638
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6A5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
246 262Right-handed alpha
Helix 2
AA2
A
266 271Right-handed alpha
Helix 3
AA3
A
279 304Right-handed alpha
Helix 4
AA4
A
307 311Right-handed 310
Helix 5
AA5
A
312 337Right-handed alpha
Helix 6
AA6
A
346 354Right-handed alpha
Helix 7
AA7
A
358 360Right-handed 310
Helix 8
AA8
A
361 374Right-handed alpha
Helix 9
AA9
A
378 391Right-handed alpha
Helix 10
AB1
A
400 423Right-handed alpha
Helix 11
AB2
A
428 454Right-handed alpha
Helix 12
AB3
A
462 470Right-handed alpha
Helix 13
AB4
D
231 242Right-handed alpha
Helix 14
AB5
D
263 285Right-handed alpha
Helix 15
AB6
D
293 317Right-handed alpha
Helix 16
AB7
D
334 340Right-handed alpha
Helix 17
AB8
D
342 353Right-handed alpha
Helix 18
AB9
D
353 360Right-handed alpha
Helix 19
AC1
D
363 376Right-handed alpha
Helix 20
AC2
D
385 408Right-handed alpha
Helix 21
AC3
D
413 420Right-handed alpha
Helix 22
AC4
D
420 443Right-handed alpha
Helix 23
AC5
D
448 455Right-handed alpha
Helix 24
AC6
H
246 262Right-handed alpha
Helix 25
AC7
H
266 271Right-handed alpha
Helix 26
AC8
H
279 304Right-handed alpha
Helix 27
AC9
H
307 311Right-handed 310
Helix 28
AD1
H
312 337Right-handed alpha
Helix 29
AD2
H
343 354Right-handed alpha
Helix 30
AD3
H
358 360Right-handed 310
Helix 31
AD4
H
361 374Right-handed alpha
Helix 32
AD5
H
378 391Right-handed alpha
Helix 33
AD6
H
400 423Right-handed alpha
Helix 34
AD7
H
428 454Right-handed alpha
Helix 35
AD8
H
462 469Right-handed alpha
Helix 36
AD9
L
231 242Right-handed alpha
Helix 37
AE1
L
264 285Right-handed alpha
Helix 38
AE2
L
293 317Right-handed alpha
Helix 39
AE3
L
334 340Right-handed alpha
Helix 40
AE4
L
342 353Right-handed alpha
Helix 41
AE5
L
353 360Right-handed alpha
Helix 42
AE6
L
363 376Right-handed alpha
Helix 43
AE7
L
385 408Right-handed alpha
Helix 44
AE8
L
413 420Right-handed alpha
Helix 45
AE9
L
420 443Right-handed alpha
Helix 46
AF1
L
448 455Right-handed alpha
Helix 47
AF2
E
746 754Right-handed alpha
Helix 48
AF3
F
631 638Right-handed alpha
Helix 49
AF4
G
746 754Right-handed alpha
Helix 50
AF5
I
631 638Right-handed alpha
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There are 2 sheets in PDB entry 6A5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
323 325first strand
Strand 2
D
331 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
323 325first strand
Strand 2
L
331 333anti-parallel
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