Analysis of interatomic Contacts of Structural Units in PDB entry:
6A60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A60 entry

There are 4 chains in PDB entry 6A60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 244VAL 471
B
 LYS 747GLN 754
D
 GLU 228ALA 457
F
 ARG 629GLU 639
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6A60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
249 258Right-handed alpha
Helix 2
AA2
A
279 304Right-handed alpha
Helix 3
AA3
A
312 337Right-handed alpha
Helix 4
AA4
A
347 354Right-handed alpha
Helix 5
AA5
A
358 360Right-handed 310
Helix 6
AA6
A
361 373Right-handed alpha
Helix 7
AA7
A
377 391Right-handed alpha
Helix 8
AA8
A
400 423Right-handed alpha
Helix 9
AA9
A
428 453Right-handed alpha
Helix 10
AB1
A
462 469Right-handed alpha
Helix 11
AB2
B
749 753Right-handed 310
Helix 12
AB3
D
231 242Right-handed alpha
Helix 13
AB4
D
264 285Right-handed alpha
Helix 14
AB5
D
293 317Right-handed alpha
Helix 15
AB6
D
334 339Right-handed alpha
Helix 16
AB7
D
342 353Right-handed alpha
Helix 17
AB8
D
353 360Right-handed alpha
Helix 18
AB9
D
363 376Right-handed alpha
Helix 19
AC1
D
385 408Right-handed alpha
Helix 20
AC2
D
414 420Right-handed alpha
Helix 21
AC3
D
421 443Right-handed alpha
Helix 22
AC4
D
448 455Right-handed alpha
Helix 23
AC5
F
630 638Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6A60.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
323 325first strand
Strand 2
D
331 333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il