Analysis of interatomic Contacts of Structural Units in PDB entry:
6A69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A69 entry

There are 2 chains in PDB entry 6A69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2THR 1063
B
 ALA 120LYS 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6A69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 37Right-handed alpha
Helix 2
AA2
A
76 84Right-handed alpha
Helix 3
AA3
A
97 106Right-handed alpha
Helix 4
AA4
A
108 124Right-handed alpha
Helix 5
AA5
A
153 190Right-handed alpha
Helix 6
AA6
A
278 281Right-handed 310
Helix 7
AA7
A
282 290Right-handed alpha
Helix 8
AA8
A
362 397Right-handed alpha
Helix 9
AA9
A
409 431Right-handed alpha
Helix 10
AB1
A
436 451Right-handed alpha
Helix 11
AB2
A
461 466Right-handed alpha
Helix 12
AB3
A
508 519Right-handed alpha
Helix 13
AB4
A
543 552Right-handed alpha
Helix 14
AB5
A
559 564Right-handed alpha
Helix 15
AB6
A
603 608Right-handed alpha
Helix 16
AB7
A
625 632Right-handed alpha
Helix 17
AB8
A
689 700Right-handed alpha
Helix 18
AB9
A
712 723Right-handed alpha
Helix 19
AC1
A
750 757Right-handed alpha
Helix 20
AC2
A
769 781Right-handed alpha
Helix 21
AC3
A
801 808Right-handed alpha
Helix 22
AC4
A
819 825Right-handed alpha
Helix 23
AC5
A
834 877Right-handed alpha
Helix 24
AC6
A
885 895Right-handed alpha
Helix 25
AC7
A
896 903Right-handed alpha
Helix 26
AC8
A
909 913Right-handed 310
Helix 27
AC9
A
925 949Right-handed alpha
Helix 28
AD1
A
970 990Right-handed alpha
Helix 29
AD2
A
1007 1026Right-handed alpha
Helix 30
AD3
A
1039 1058Right-handed alpha
Helix 31
AD4
B
224 245Right-handed alpha
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There are 9 sheets in PDB entry 6A69. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 216first strand
Strand 2
A
273 275anti-parallel
Strand 3
A
228 230anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
266 268anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 457first strand
Strand 2
A
828 830anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
471 474first strand
Strand 2
A
703 707parallel
Strand 3
A
764 765parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 487first strand
Strand 2
A
682 683anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
585 589first strand
Strand 2
A
597 601anti-parallel
Strand 3
A
651 652anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
613 616first strand
Strand 2
A
620 623anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 126first strand
Strand 2
B
139 146anti-parallel
Strand 3
B
181 186anti-parallel
Strand 4
B
173 177anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 133first strand
Strand 2
B
208 217parallel
Strand 3
B
196 203anti-parallel
Strand 4
B
152 159anti-parallel
Strand 5
B
162 165anti-parallel
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