Analysis of interatomic Contacts of Structural Units in PDB entry:
6A6M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A6M entry

There is 1 chain in PDB entry 6A6M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 101ALA 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6A6M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
101 133Right-handed alpha
Helix 2
AA2
A
133 150Right-handed alpha
Helix 3
AA3
A
161 205Right-handed alpha
Helix 4
AA4
A
208 214Right-handed alpha
Helix 5
AA5
A
218 237Right-handed alpha
Helix 6
AA6
A
237 253Right-handed alpha
Helix 7
AA7
A
265 270Right-handed alpha
Helix 8
AA8
A
273 276Right-handed 310
Helix 9
AA9
A
277 307Right-handed alpha
Helix 10
AB1
A
308 315Right-handed alpha
Helix 11
AB2
A
317 367Right-handed alpha
Helix 12
AB3
A
368 372Right-handed 310
Helix 13
AB4
A
378 390Right-handed alpha
Helix 14
AB5
A
391 419Right-handed alpha
Helix 15
AB6
A
483 492Right-handed alpha
Helix 16
AB7
A
513 515Right-handed 310
Helix 17
AB8
A
516 522Right-handed alpha
Helix 18
AB9
A
537 544Right-handed alpha
Helix 19
AC1
A
550 561Right-handed alpha
Helix 20
AC2
A
563 570Right-handed alpha
Helix 21
AC3
A
572 576Right-handed 310
Helix 22
AC4
A
579 583Right-handed 310
Helix 23
AC5
A
586 600Right-handed alpha
Helix 24
AC6
A
616 635Right-handed alpha
Helix 25
AC7
A
644 649Right-handed alpha
Helix 26
AC8
A
667 674Right-handed alpha
Helix 27
AC9
A
678 688Right-handed alpha
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There are 2 sheets in PDB entry 6A6M. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 469first strand
Strand 2
A
442 450anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
510 511anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 527first strand
Strand 2
A
605 609parallel
Strand 3
A
637 641parallel
Strand 4
A
473 478parallel
Strand 5
A
653 658parallel
Strand 6
A
661 666anti-parallel
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