Analysis of interatomic Contacts of Structural Units in PDB entry:
6A6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A6N entry

There is 1 chain in PDB entry 6A6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 102LEU 688
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 6A6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
102 117Right-handed alpha
Helix 2
AA2
A
117 132Right-handed alpha
Helix 3
AA3
A
133 149Right-handed alpha
Helix 4
AA4
A
152 160Right-handed alpha
Helix 5
AA5
A
160 205Right-handed alpha
Helix 6
AA6
A
208 214Right-handed alpha
Helix 7
AA7
A
218 259Right-handed alpha
Helix 8
AA8
A
259 278Right-handed alpha
Helix 9
AA9
A
280 286Right-handed alpha
Helix 10
AB1
A
286 307Right-handed alpha
Helix 11
AB2
A
308 315Right-handed alpha
Helix 12
AB3
A
317 370Right-handed alpha
Helix 13
AB4
A
375 419Right-handed alpha
Helix 14
AB5
A
480 492Right-handed alpha
Helix 15
AB6
A
513 515Right-handed 310
Helix 16
AB7
A
516 522Right-handed alpha
Helix 17
AB8
A
538 544Right-handed alpha
Helix 18
AB9
A
550 561Right-handed alpha
Helix 19
AC1
A
563 569Right-handed alpha
Helix 20
AC2
A
572 575Right-handed 310
Helix 21
AC3
A
586 600Right-handed alpha
Helix 22
AC4
A
619 633Right-handed alpha
Helix 23
AC5
A
644 651Right-handed alpha
Helix 24
AC6
A
667 673Right-handed alpha
Helix 25
AC7
A
678 687Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 6A6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 469first strand
Strand 2
A
442 450anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
510 511anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 527first strand
Strand 2
A
605 608parallel
Strand 3
A
637 640parallel
Strand 4
A
473 478parallel
Strand 5
A
653 658parallel
Strand 6
A
661 666anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
536 537first strand
Strand 2
A
577 578anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il