Analysis of interatomic Contacts of Structural Units in PDB entry:
6A6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A6Q entry

There are 2 chains in PDB entry 6A6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS -1VAL 170
A
 MET 172GLY 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6A6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
16 28Right-handed alpha
Helix 3
AA3
A
35 50Right-handed alpha
Helix 4
AA4
A
53 59Right-handed alpha
Helix 5
AA5
A
69 74Right-handed alpha
Helix 6
AA6
A
74 79Right-handed alpha
Helix 7
AA7
A
80 85Right-handed 310
Helix 8
AA8
A
87 102Right-handed alpha
Helix 9
AA9
A
104 119Right-handed alpha
Helix 10
AB1
A
150 163Right-handed alpha
Helix 11
AB2
A
165 173Right-handed alpha
Helix 12
AB3
A
174 178Right-handed 310
Helix 13
AB4
A
202 208Right-handed alpha
Helix 14
AB5
A
236 242Right-handed alpha
Helix 15
AB6
A
247 254Right-handed alpha
Helix 16
AB7
A
257 274Right-handed alpha
Helix 17
AB8
A
278 282Right-handed 310
Helix 18
AB9
A
286 289Right-handed 310
Helix 19
AC1
A
309 313Right-handed 310
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There are 4 sheets in PDB entry 6A6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 2first strand
Strand 2
A
8 9anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
283 284anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
191 192anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
234 235anti-parallel
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