Analysis of interatomic Contacts of Structural Units in PDB entry:
6A6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A6T entry

There are 2 chains in PDB entry 6A6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 4PHE 152
A
 GLY 154ARG 433
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6A6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
32 34Right-handed 310
Helix 3
AA3
A
66 81Right-handed alpha
Helix 4
AA4
A
84 86Right-handed 310
Helix 5
AA5
A
99 116Right-handed alpha
Helix 6
AA6
A
119 122Right-handed 310
Helix 7
AA7
A
129 137Right-handed alpha
Helix 8
AA8
A
160 176Right-handed alpha
Helix 9
AA9
A
181 185Right-handed 310
Helix 10
AB1
A
220 222Right-handed 310
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
247 253Right-handed alpha
Helix 13
AB4
A
318 333Right-handed alpha
Helix 14
AB5
A
334 337Right-handed 310
Helix 15
AB6
A
378 382Right-handed 310
Helix 16
AB7
A
384 394Right-handed alpha
Helix 17
AB8
A
398 406Right-handed alpha
Helix 18
AB9
A
427 429Right-handed 310
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There are 6 sheets in PDB entry 6A6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
36 39parallel
Strand 3
A
9 12parallel
Strand 4
A
215 218parallel
Strand 5
A
368 372parallel
Strand 6
A
358 361anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
157 159anti-parallel
Strand 3
A
88 89anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
149 153anti-parallel
Strand 3
A
93 97anti-parallel
Strand 4
A
259 262parallel
Strand 5
A
266 268anti-parallel
Strand 6
A
276 281anti-parallel
Strand 7
A
235 245anti-parallel
Strand 8
A
342 351anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 192first strand
Strand 2
A
200 205anti-parallel
Strand 3
A
210 212anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
424 425parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
301 304anti-parallel
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