Analysis of interatomic Contacts of Structural Units in PDB entry:
6A6V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A6V entry

There are 2 chains in PDB entry 6A6V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 3ASN 434
H
 PRO 3ASN 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6A6V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 7Right-handed 310
Helix 2
AA2
A
16 30Right-handed alpha
Helix 3
AA3
A
32 34Right-handed 310
Helix 4
AA4
A
64 81Right-handed alpha
Helix 5
AA5
A
84 86Right-handed 310
Helix 6
AA6
A
99 115Right-handed alpha
Helix 7
AA7
A
119 122Right-handed 310
Helix 8
AA8
A
129 137Right-handed alpha
Helix 9
AA9
A
160 176Right-handed alpha
Helix 10
AB1
A
183 185Right-handed 310
Helix 11
AB2
A
220 222Right-handed 310
Helix 12
AB3
A
223 228Right-handed alpha
Helix 13
AB4
A
247 252Right-handed alpha
Helix 14
AB5
A
253 255Right-handed 310
Helix 15
AB6
A
318 333Right-handed alpha
Helix 16
AB7
A
334 337Right-handed 310
Helix 17
AB8
A
378 382Right-handed 310
Helix 18
AB9
A
384 394Right-handed alpha
Helix 19
AC1
A
398 405Right-handed alpha
Helix 20
AC2
A
427 429Right-handed 310
Helix 21
AC3
H
3 7Right-handed 310
Helix 22
AC4
H
16 30Right-handed alpha
Helix 23
AC5
H
32 34Right-handed 310
Helix 24
AC6
H
66 81Right-handed alpha
Helix 25
AC7
H
84 86Right-handed 310
Helix 26
AC8
H
99 115Right-handed alpha
Helix 27
AC9
H
119 122Right-handed 310
Helix 28
AD1
H
129 137Right-handed alpha
Helix 29
AD2
H
160 176Right-handed alpha
Helix 30
AD3
H
183 185Right-handed 310
Helix 31
AD4
H
220 222Right-handed 310
Helix 32
AD5
H
223 228Right-handed alpha
Helix 33
AD6
H
247 253Right-handed alpha
Helix 34
AD7
H
318 333Right-handed alpha
Helix 35
AD8
H
334 337Right-handed 310
Helix 36
AD9
H
378 382Right-handed 310
Helix 37
AE1
H
384 394Right-handed alpha
Helix 38
AE2
H
398 405Right-handed alpha
Helix 39
AE3
H
427 429Right-handed 310
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There are 12 sheets in PDB entry 6A6V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
36 40parallel
Strand 3
A
9 12parallel
Strand 4
A
215 218parallel
Strand 5
A
368 372parallel
Strand 6
A
358 361anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
157 159anti-parallel
Strand 3
A
88 89anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 127first strand
Strand 2
A
149 153anti-parallel
Strand 3
A
93 97anti-parallel
Strand 4
A
259 262parallel
Strand 5
A
266 268anti-parallel
Strand 6
A
276 280anti-parallel
Strand 7
A
235 245anti-parallel
Strand 8
A
342 351anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 192first strand
Strand 2
A
200 205anti-parallel
Strand 3
A
210 212anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
424 425parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
301 304anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
178 181first strand
Strand 2
H
36 40parallel
Strand 3
H
9 12parallel
Strand 4
H
215 218parallel
Strand 5
H
368 372parallel
Strand 6
H
358 361anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
56 58first strand
Strand 2
H
157 159anti-parallel
Strand 3
H
88 89anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
124 127first strand
Strand 2
H
149 153anti-parallel
Strand 3
H
93 97anti-parallel
Strand 4
H
259 262parallel
Strand 5
H
266 268anti-parallel
Strand 6
H
276 280anti-parallel
Strand 7
H
235 245anti-parallel
Strand 8
H
342 351anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
187 192first strand
Strand 2
H
200 205anti-parallel
Strand 3
H
210 212anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
286 287first strand
Strand 2
H
424 425parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
289 292first strand
Strand 2
H
301 304anti-parallel
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