Analysis of interatomic Contacts of Structural Units in PDB entry:
6A7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A7W entry

There are 2 chains in PDB entry 6A7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 215GLN 538
B
 THR 215GLN 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6A7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
229 233Right-handed 310
Helix 2
AA2
A
247 255Right-handed 310
Helix 3
AA3
A
263 267Right-handed 310
Helix 4
AA4
A
285 291Right-handed alpha
Helix 5
AA5
A
294 299Right-handed alpha
Helix 6
AA6
A
303 307Right-handed 310
Helix 7
AA7
A
309 317Right-handed alpha
Helix 8
AA8
A
338 340Right-handed 310
Helix 9
AA9
A
363 368Right-handed 310
Helix 10
AB1
A
370 378Right-handed alpha
Helix 11
AB2
A
396 400Right-handed 310
Helix 12
AB3
A
402 406Right-handed 310
Helix 13
AB4
A
416 420Right-handed 310
Helix 14
AB5
A
421 449Right-handed alpha
Helix 15
AB6
A
469 473Right-handed 310
Helix 16
AB7
A
484 488Right-handed 310
Helix 17
AB8
A
514 523Right-handed alpha
Helix 18
AB9
B
229 233Right-handed 310
Helix 19
AC1
B
247 255Right-handed 310
Helix 20
AC2
B
263 267Right-handed 310
Helix 21
AC3
B
285 291Right-handed alpha
Helix 22
AC4
B
294 299Right-handed alpha
Helix 23
AC5
B
303 307Right-handed 310
Helix 24
AC6
B
309 317Right-handed alpha
Helix 25
AC7
B
338 340Right-handed 310
Helix 26
AC8
B
363 369Right-handed 310
Helix 27
AC9
B
370 378Right-handed alpha
Helix 28
AD1
B
396 400Right-handed 310
Helix 29
AD2
B
402 406Right-handed 310
Helix 30
AD3
B
416 420Right-handed 310
Helix 31
AD4
B
421 449Right-handed alpha
Helix 32
AD5
B
484 488Right-handed 310
Helix 33
AD6
B
514 523Right-handed alpha
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There are 7 sheets in PDB entry 6A7W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
525 526anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 273first strand
Strand 2
A
492 496anti-parallel
Strand 3
A
455 462anti-parallel
Strand 4
A
236 243parallel
Strand 5
A
383 388parallel
Strand 6
A
320 325parallel
Strand 7
A
342 344parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 277first strand
Strand 2
A
510 511parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 226first strand
Strand 2
B
525 526anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 273first strand
Strand 2
B
492 496anti-parallel
Strand 3
B
455 462anti-parallel
Strand 4
B
236 243parallel
Strand 5
B
383 388parallel
Strand 6
B
320 325parallel
Strand 7
B
342 344parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 277first strand
Strand 2
B
510 511parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 470first strand
Strand 2
B
473 475anti-parallel
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