Analysis of interatomic Contacts of Structural Units in PDB entry:
6A83


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A83 entry

There is 1 chain in PDB entry 6A83 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 221GLN 577
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6A83. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
248 256Right-handed 310
Helix 2
AA2
A
262 272Right-handed alpha
Helix 3
AA3
A
287 296Right-handed alpha
Helix 4
AA4
A
305 310Right-handed alpha
Helix 5
AA5
A
312 320Right-handed alpha
Helix 6
AA6
A
338 346Right-handed alpha
Helix 7
AA7
A
364 367Right-handed 310
Helix 8
AA8
A
368 377Right-handed alpha
Helix 9
AA9
A
395 400Right-handed 310
Helix 10
AB1
A
401 405Right-handed 310
Helix 11
AB2
A
419 450Right-handed alpha
Helix 12
AB3
A
483 487Right-handed 310
Helix 13
AB4
A
496 503Right-handed alpha
Helix 14
AB5
A
519 529Right-handed alpha
Helix 15
AB6
A
536 540Right-handed 310
Helix 16
AB7
A
566 568Right-handed 310
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There are 5 sheets in PDB entry 6A83. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 230first strand
Strand 2
A
530 531anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
491 495anti-parallel
Strand 3
A
455 460anti-parallel
Strand 4
A
237 244parallel
Strand 5
A
382 388parallel
Strand 6
A
323 328parallel
Strand 7
A
349 352parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
515 516parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 466first strand
Strand 2
A
475 476anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
552 553first strand
Strand 2
A
563 564anti-parallel
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