Analysis of interatomic Contacts of Structural Units in PDB entry:
6A8K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A8K entry

There is 1 chain in PDB entry 6A8K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3THR 246
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6A8K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 19Right-handed 310
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
80 101Right-handed alpha
Helix 4
AA4
A
120 125Right-handed 310
Helix 5
AA5
A
182 184Right-handed 310
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There are 4 sheets in PDB entry 6A8K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
63 65anti-parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
34 36parallel
Strand 5
A
236 238parallel
Strand 6
A
219 226parallel
Strand 7
A
201 208parallel
Strand 8
A
186 190parallel
Strand 9
A
159 163parallel
Strand 10
A
134 138parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
63 65anti-parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
39 41parallel
Strand 5
A
21 23parallel
Strand 6
A
219 226parallel
Strand 7
A
201 208parallel
Strand 8
A
186 190parallel
Strand 9
A
159 163parallel
Strand 10
A
134 138parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
27 30parallel
Strand 3
A
230 233parallel
Strand 4
A
212 214parallel
Strand 5
A
194 196parallel
Strand 6
A
167 169parallel
Strand 7
A
142 144parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 131first strand
Strand 2
A
148 152parallel
Strand 3
A
174 178parallel
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