Analysis of interatomic Contacts of Structural Units in PDB entry:
6A9T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A9T entry

There is 1 chain in PDB entry 6A9T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 58LEU 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6A9T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
67 79Right-handed alpha
Helix 2
AA2
A
108 116Right-handed alpha
Helix 3
AA3
A
132 136Right-handed 310
Helix 4
AA4
A
146 153Right-handed alpha
Helix 5
AA5
A
157 165Right-handed alpha
Helix 6
AA6
A
176 187Right-handed alpha
Helix 7
AA7
A
203 214Right-handed alpha
Helix 8
AA8
A
234 243Right-handed alpha
Helix 9
AA9
A
246 269Right-handed alpha
Helix 10
AB1
A
274 290Right-handed alpha
Helix 11
AB2
A
304 308Right-handed 310
Helix 12
AB3
A
350 370Right-handed alpha
Helix 13
AB4
A
371 376Right-handed 310
Helix 14
AB5
A
378 397Right-handed alpha
Helix 15
AB6
A
406 411Right-handed alpha
Helix 16
AB7
A
487 498Right-handed alpha
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There are 6 sheets in PDB entry 6A9T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
65 66anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
137 142parallel
Strand 3
A
123 128anti-parallel
Strand 4
A
85 90anti-parallel
Strand 5
A
190 192parallel
Strand 6
A
231 232parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
330 332anti-parallel
Strand 3
A
335 336anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
299 302first strand
Strand 2
A
323 327anti-parallel
Strand 3
A
340 344anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 443first strand
Strand 2
A
468 472anti-parallel
Strand 3
A
477 479anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
446 449first strand
Strand 2
A
462 465anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il