Analysis of interatomic Contacts of Structural Units in PDB entry:
6AA9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AA9 entry

There are 2 chains in PDB entry 6AA9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2ILE 115
A
 ALA 117GLY 439
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6AA9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 11Right-handed alpha
Helix 2
AA2
A
12 19Right-handed alpha
Helix 3
AA3
A
32 41Right-handed alpha
Helix 4
AA4
A
43 65Right-handed alpha
Helix 5
AA5
A
82 94Right-handed alpha
Helix 6
AA6
A
107 109Right-handed 310
Helix 7
AA7
A
115 135Right-handed alpha
Helix 8
AA8
A
143 148Right-handed 310
Helix 9
AA9
A
149 158Right-handed alpha
Helix 10
AB1
A
167 181Right-handed alpha
Helix 11
AB2
A
193 202Right-handed alpha
Helix 12
AB3
A
239 248Right-handed alpha
Helix 13
AB4
A
248 260Right-handed alpha
Helix 14
AB5
A
279 294Right-handed alpha
Helix 15
AB6
A
308 317Right-handed alpha
Helix 16
AB7
A
318 322Right-handed 310
Helix 17
AB8
A
345 352Right-handed alpha
Helix 18
AB9
A
362 378Right-handed alpha
Helix 19
AC1
A
382 389Right-handed 310
Helix 20
AC2
A
390 398Right-handed alpha
Helix 21
AC3
A
398 405Right-handed alpha
Helix 22
AC4
A
408 414Right-handed alpha
Helix 23
AC5
A
428 437Right-handed alpha
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There are 2 sheets in PDB entry 6AA9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
355 361anti-parallel
Strand 3
A
297 304parallel
Strand 4
A
270 275parallel
Strand 5
A
416 421parallel
Strand 6
A
100 105parallel
Strand 7
A
79 81anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 210first strand
Strand 2
A
183 189parallel
Strand 3
A
160 164parallel
Strand 4
A
231 233parallel
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