Analysis of interatomic Contacts of Structural Units in PDB entry:
6AAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AAE entry

There are 2 chains in PDB entry 6AAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2GLU 309
B
 PRO 2HIS 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6AAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 16Right-handed alpha
Helix 2
AA2
A
26 39Right-handed alpha
Helix 3
AA3
A
91 103Right-handed alpha
Helix 4
AA4
A
120 136Right-handed alpha
Helix 5
AA5
A
136 141Right-handed alpha
Helix 6
AA6
A
153 169Right-handed alpha
Helix 7
AA7
A
190 197Right-handed alpha
Helix 8
AA8
A
204 217Right-handed alpha
Helix 9
AA9
A
220 224Right-handed 310
Helix 10
AB1
A
228 232Right-handed 310
Helix 11
AB2
A
251 265Right-handed alpha
Helix 12
AB3
A
280 285Right-handed 310
Helix 13
AB4
A
290 306Right-handed alpha
Helix 14
AB5
B
4 15Right-handed alpha
Helix 15
AB6
B
26 35Right-handed alpha
Helix 16
AB7
B
91 103Right-handed alpha
Helix 17
AB8
B
120 136Right-handed alpha
Helix 18
AB9
B
136 141Right-handed alpha
Helix 19
AC1
B
153 169Right-handed alpha
Helix 20
AC2
B
190 197Right-handed alpha
Helix 21
AC3
B
204 217Right-handed alpha
Helix 22
AC4
B
220 224Right-handed 310
Helix 23
AC5
B
228 232Right-handed 310
Helix 24
AC6
B
251 265Right-handed alpha
Helix 25
AC7
B
280 285Right-handed 310
Helix 26
AC8
B
290 306Right-handed alpha
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There are 2 sheets in PDB entry 6AAE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
45 53first strand
Strand 2
A
56 64anti-parallel
Strand 3
A
105 109anti-parallel
Strand 4
A
74 78parallel
Strand 5
A
147 152parallel
Strand 6
A
176 180parallel
Strand 7
A
241 246parallel
Strand 8
A
269 274parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 53first strand
Strand 2
B
56 64anti-parallel
Strand 3
B
105 109anti-parallel
Strand 4
B
74 78parallel
Strand 5
B
147 152parallel
Strand 6
B
176 180parallel
Strand 7
B
241 246parallel
Strand 8
B
269 274parallel
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