Analysis of interatomic Contacts of Structural Units in PDB entry:
6AB5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AB5 entry

There is 1 chain in PDB entry 6AB5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 66SER 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6AB5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 92Right-handed 310
Helix 2
AA2
A
108 115Right-handed alpha
Helix 3
AA3
A
152 156Right-handed 310
Helix 4
AA4
A
160 169Right-handed alpha
Helix 5
AA5
A
202 206Right-handed 310
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There are 4 sheets in PDB entry 6AB5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 81first strand
Strand 2
A
231 244anti-parallel
Strand 3
A
127 131anti-parallel
Strand 4
A
181 183anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
94 99first strand
Strand 2
A
210 215anti-parallel
Strand 3
A
140 146anti-parallel
Strand 4
A
173 176anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
194 195anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 264first strand
Strand 2
A
360 366anti-parallel
Strand 3
A
287 292anti-parallel
Strand 4
A
328 337anti-parallel
Strand 5
A
316 323anti-parallel
Strand 6
A
307 312anti-parallel
Strand 7
A
344 350anti-parallel
Strand 8
A
275 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il