Analysis of interatomic Contacts of Structural Units in PDB entry:
6ABX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ABX entry

There are 2 chains in PDB entry 6ABX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 370
B
 MET 1ARG 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6ABX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
34 41Right-handed alpha
Helix 3
AA3
A
42 53Right-handed alpha
Helix 4
AA4
A
57 70Right-handed alpha
Helix 5
AA5
A
75 86Right-handed alpha
Helix 6
AA6
A
90 106Right-handed alpha
Helix 7
AA7
A
111 135Right-handed alpha
Helix 8
AA8
A
147 158Right-handed alpha
Helix 9
AA9
A
162 175Right-handed alpha
Helix 10
AB1
A
182 193Right-handed alpha
Helix 11
AB2
A
197 210Right-handed alpha
Helix 12
AB3
A
219 229Right-handed alpha
Helix 13
AB4
A
230 232Right-handed 310
Helix 14
AB5
A
233 244Right-handed alpha
Helix 15
AB6
A
260 271Right-handed alpha
Helix 16
AB7
A
276 298Right-handed alpha
Helix 17
AB8
A
299 301Right-handed 310
Helix 18
AB9
A
305 308Right-handed 310
Helix 19
AC1
A
309 317Right-handed alpha
Helix 20
AC2
A
320 322Right-handed 310
Helix 21
AC3
A
323 344Right-handed alpha
Helix 22
AC4
A
345 347Right-handed 310
Helix 23
AC5
A
366 370Right-handed 310
Helix 24
AC6
B
4 8Right-handed 310
Helix 25
AC7
B
34 41Right-handed alpha
Helix 26
AC8
B
42 53Right-handed alpha
Helix 27
AC9
B
57 70Right-handed alpha
Helix 28
AD1
B
75 86Right-handed alpha
Helix 29
AD2
B
90 106Right-handed alpha
Helix 30
AD3
B
111 135Right-handed alpha
Helix 31
AD4
B
147 158Right-handed alpha
Helix 32
AD5
B
162 177Right-handed alpha
Helix 33
AD6
B
182 194Right-handed alpha
Helix 34
AD7
B
197 210Right-handed alpha
Helix 35
AD8
B
216 229Right-handed alpha
Helix 36
AD9
B
230 232Right-handed 310
Helix 37
AE1
B
233 244Right-handed alpha
Helix 38
AE2
B
260 271Right-handed alpha
Helix 39
AE3
B
276 298Right-handed alpha
Helix 40
AE4
B
299 301Right-handed 310
Helix 41
AE5
B
306 317Right-handed alpha
Helix 42
AE6
B
320 322Right-handed 310
Helix 43
AE7
B
323 345Right-handed alpha
Helix 44
AE8
B
366 370Right-handed 310
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There are 4 sheets in PDB entry 6ABX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 15first strand
Strand 2
B
353 356parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
26 29anti-parallel
Strand 3
A
32 33anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 356first strand
Strand 2
B
11 15parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 21first strand
Strand 2
B
26 29anti-parallel
Strand 3
B
32 33anti-parallel
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