Analysis of interatomic Contacts of Structural Units in PDB entry:
6AC3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6AC3 entry

There are 4 chains in PDB entry 6AC3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 6	LYS 437
B	GLU 4	SER 544
C	ILE 6	ARG 435
D	ASN 8	LEU 436

There are 63 helices in PDB entry 6AC3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	32	Right-handed alpha
Helix 2	AA2	A	33	35	Right-handed 310
Helix 3	AA3	A	49	68	Right-handed alpha
Helix 4	AA4	A	82	84	Right-handed 310
Helix 5	AA5	A	85	96	Right-handed alpha
Helix 6	AA6	A	107	119	Right-handed alpha
Helix 7	AA7	A	129	138	Right-handed alpha
Helix 8	AA8	A	161	169	Right-handed alpha
Helix 9	AA9	A	209	221	Right-handed alpha
Helix 10	AB1	A	242	251	Right-handed alpha
Helix 11	AB2	A	269	277	Right-handed alpha
Helix 12	AB3	A	285	294	Right-handed alpha
Helix 13	AB4	A	319	328	Right-handed alpha
Helix 14	AB5	A	403	410	Right-handed alpha
Helix 15	AB6	A	426	430	Right-handed 310
Helix 16	AB7	B	20	32	Right-handed alpha
Helix 17	AB8	B	33	35	Right-handed 310
Helix 18	AB9	B	49	67	Right-handed alpha
Helix 19	AC1	B	82	84	Right-handed 310
Helix 20	AC2	B	85	96	Right-handed alpha
Helix 21	AC3	B	107	119	Right-handed alpha
Helix 22	AC4	B	129	138	Right-handed alpha
Helix 23	AC5	B	160	169	Right-handed alpha
Helix 24	AC6	B	174	178	Right-handed 310
Helix 25	AC7	B	209	221	Right-handed alpha
Helix 26	AC8	B	242	251	Right-handed alpha
Helix 27	AC9	B	252	256	Right-handed 310
Helix 28	AD1	B	268	277	Right-handed alpha
Helix 29	AD2	B	285	294	Right-handed alpha
Helix 30	AD3	B	319	328	Right-handed alpha
Helix 31	AD4	B	402	410	Right-handed alpha
Helix 32	AD5	B	492	500	Right-handed alpha
Helix 33	AD6	B	523	527	Right-handed 310
Helix 34	AD7	B	530	539	Right-handed alpha
Helix 35	AD8	C	20	32	Right-handed alpha
Helix 36	AD9	C	33	35	Right-handed 310
Helix 37	AE1	C	49	67	Right-handed alpha
Helix 38	AE2	C	85	96	Right-handed alpha
Helix 39	AE3	C	107	119	Right-handed alpha
Helix 40	AE4	C	129	138	Right-handed alpha
Helix 41	AE5	C	161	167	Right-handed alpha
Helix 42	AE6	C	174	178	Right-handed 310
Helix 43	AE7	C	209	221	Right-handed alpha
Helix 44	AE8	C	242	251	Right-handed alpha
Helix 45	AE9	C	252	256	Right-handed 310
Helix 46	AF1	C	268	277	Right-handed alpha
Helix 47	AF2	C	285	294	Right-handed alpha
Helix 48	AF3	C	319	328	Right-handed alpha
Helix 49	AF4	C	402	410	Right-handed alpha
Helix 50	AF5	D	20	32	Right-handed alpha
Helix 51	AF6	D	33	35	Right-handed 310
Helix 52	AF7	D	49	67	Right-handed alpha
Helix 53	AF8	D	85	96	Right-handed alpha
Helix 54	AF9	D	107	119	Right-handed alpha
Helix 55	AG1	D	129	138	Right-handed alpha
Helix 56	AG2	D	161	169	Right-handed alpha
Helix 57	AG3	D	174	178	Right-handed 310
Helix 58	AG4	D	209	221	Right-handed alpha
Helix 59	AG5	D	242	251	Right-handed alpha
Helix 60	AG6	D	269	277	Right-handed alpha
Helix 61	AG7	D	285	294	Right-handed alpha
Helix 62	AG8	D	317	328	Right-handed alpha
Helix 63	AG9	D	402	410	Right-handed alpha

There are 18 sheets in PDB entry 6AC3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	48	first strand
Strand 2	A	39	41	anti-parallel
Strand 3	A	258	261	parallel
Strand 4	A	233	236	parallel
Strand 5	A	281	284	parallel
Strand 6	A	308	311	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	160	first strand
Strand 2	A	145	148	parallel
Strand 3	A	122	125	parallel
Strand 4	A	75	78	parallel
Strand 5	A	99	102	parallel
Strand 6	A	189	195	parallel
Strand 7	A	203	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	387	392	anti-parallel
Strand 3	A	416	421	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	39	41	anti-parallel
Strand 3	B	258	261	parallel
Strand 4	B	233	236	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	99	102	first strand
Strand 2	B	75	78	parallel
Strand 3	B	122	125	parallel
Strand 4	B	145	148	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	191	first strand
Strand 2	B	203	208	anti-parallel
Strand 3	B	194	195	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	191	first strand
Strand 2	B	203	208	anti-parallel
Strand 3	B	398	399	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	281	284	first strand
Strand 2	B	308	311	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	371	first strand
Strand 2	B	386	392	anti-parallel
Strand 3	B	416	424	anti-parallel
Strand 4	B	432	436	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	482	483	first strand
Strand 2	B	515	516	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	48	first strand
Strand 2	C	39	41	anti-parallel
Strand 3	C	258	261	parallel
Strand 4	C	233	236	parallel
Strand 5	C	281	284	parallel
Strand 6	C	308	311	parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	159	160	first strand
Strand 2	C	145	148	parallel
Strand 3	C	122	125	parallel
Strand 4	C	75	78	parallel
Strand 5	C	99	102	parallel
Strand 6	C	189	195	parallel
Strand 7	C	203	208	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	370	first strand
Strand 2	C	387	392	anti-parallel
Strand 3	C	416	421	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	432	433	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	47	48	first strand
Strand 2	D	39	41	anti-parallel
Strand 3	D	258	261	parallel
Strand 4	D	233	236	parallel
Strand 5	D	279	284	parallel
Strand 6	D	308	311	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	102	first strand
Strand 2	D	75	78	parallel
Strand 3	D	122	125	parallel
Strand 4	D	145	148	parallel
Strand 5	D	159	160	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	194	first strand
Strand 2	D	204	208	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	367	371	first strand
Strand 2	D	387	392	anti-parallel
Strand 3	D	416	424	anti-parallel
Strand 4	D	432	436	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6AC3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6AC3