Analysis of interatomic Contacts of Structural Units in PDB entry:
6AC8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6AC8 entry

There are 2 chains in PDB entry 6AC8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 8	PHE 1206
B	SER 8	SER 1207

There are 98 helices in PDB entry 6AC8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	21	Right-handed alpha
Helix 2	AA2	A	23	35	Right-handed alpha
Helix 3	AA3	A	45	47	Right-handed 310
Helix 4	AA4	A	48	58	Right-handed alpha
Helix 5	AA5	A	68	84	Right-handed alpha
Helix 6	AA6	A	104	120	Right-handed alpha
Helix 7	AA7	A	137	142	Right-handed alpha
Helix 8	AA8	A	163	174	Right-handed alpha
Helix 9	AA9	A	248	261	Right-handed alpha
Helix 10	AB1	A	272	283	Right-handed alpha
Helix 11	AB2	A	288	291	Right-handed 310
Helix 12	AB3	A	292	297	Right-handed alpha
Helix 13	AB4	A	303	308	Right-handed 310
Helix 14	AB5	A	318	341	Right-handed alpha
Helix 15	AB6	A	342	347	Right-handed alpha
Helix 16	AB7	A	353	358	Right-handed alpha
Helix 17	AB8	A	359	361	Right-handed 310
Helix 18	AB9	A	364	375	Right-handed alpha
Helix 19	AC1	A	404	422	Right-handed alpha
Helix 20	AC2	A	434	445	Right-handed alpha
Helix 21	AC3	A	477	479	Right-handed 310
Helix 22	AC4	A	486	491	Right-handed alpha
Helix 23	AC5	A	569	571	Right-handed 310
Helix 24	AC6	A	590	617	Right-handed alpha
Helix 25	AC7	A	629	637	Right-handed alpha
Helix 26	AC8	A	644	660	Right-handed alpha
Helix 27	AC9	A	675	689	Right-handed alpha
Helix 28	AD1	A	700	715	Right-handed alpha
Helix 29	AD2	A	730	735	Right-handed alpha
Helix 30	AD3	A	753	757	Right-handed 310
Helix 31	AD4	A	773	776	Right-handed 310
Helix 32	AD5	A	777	791	Right-handed alpha
Helix 33	AD6	A	802	809	Right-handed alpha
Helix 34	AD7	A	836	850	Right-handed alpha
Helix 35	AD8	A	860	862	Right-handed 310
Helix 36	AD9	A	863	875	Right-handed alpha
Helix 37	AE1	A	888	901	Right-handed alpha
Helix 38	AE2	A	910	915	Right-handed alpha
Helix 39	AE3	A	929	933	Right-handed 310
Helix 40	AE4	A	934	943	Right-handed alpha
Helix 41	AE5	A	965	977	Right-handed alpha
Helix 42	AE6	A	985	1001	Right-handed alpha
Helix 43	AE7	A	1005	1010	Right-handed alpha
Helix 44	AE8	A	1013	1030	Right-handed alpha
Helix 45	AE9	A	1063	1077	Right-handed alpha
Helix 46	AF1	A	1079	1095	Right-handed alpha
Helix 47	AF2	A	1098	1117	Right-handed alpha
Helix 48	AF3	A	1138	1149	Right-handed alpha
Helix 49	AF4	A	1178	1193	Right-handed alpha
Helix 50	AF5	B	13	21	Right-handed alpha
Helix 51	AF6	B	23	36	Right-handed alpha
Helix 52	AF7	B	45	47	Right-handed 310
Helix 53	AF8	B	48	57	Right-handed alpha
Helix 54	AF9	B	58	60	Right-handed 310
Helix 55	AG1	B	68	84	Right-handed alpha
Helix 56	AG2	B	104	120	Right-handed alpha
Helix 57	AG3	B	137	142	Right-handed alpha
Helix 58	AG4	B	145	151	Right-handed 310
Helix 59	AG5	B	163	174	Right-handed alpha
Helix 60	AG6	B	248	262	Right-handed alpha
Helix 61	AG7	B	272	282	Right-handed alpha
Helix 62	AG8	B	288	291	Right-handed 310
Helix 63	AG9	B	292	297	Right-handed alpha
Helix 64	AH1	B	304	308	Right-handed 310
Helix 65	AH2	B	318	341	Right-handed alpha
Helix 66	AH3	B	353	358	Right-handed alpha
Helix 67	AH4	B	359	361	Right-handed 310
Helix 68	AH5	B	364	375	Right-handed alpha
Helix 69	AH6	B	404	422	Right-handed alpha
Helix 70	AH7	B	433	445	Right-handed alpha
Helix 71	AH8	B	477	479	Right-handed 310
Helix 72	AH9	B	487	490	Right-handed 310
Helix 73	AI1	B	569	571	Right-handed 310
Helix 74	AI2	B	591	620	Right-handed alpha
Helix 75	AI3	B	629	637	Right-handed alpha
Helix 76	AI4	B	644	660	Right-handed alpha
Helix 77	AI5	B	675	690	Right-handed alpha
Helix 78	AI6	B	700	715	Right-handed alpha
Helix 79	AI7	B	773	776	Right-handed 310
Helix 80	AI8	B	777	788	Right-handed alpha
Helix 81	AI9	B	802	809	Right-handed alpha
Helix 82	AJ1	B	836	850	Right-handed alpha
Helix 83	AJ2	B	860	862	Right-handed 310
Helix 84	AJ3	B	863	875	Right-handed alpha
Helix 85	AJ4	B	888	901	Right-handed alpha
Helix 86	AJ5	B	910	915	Right-handed alpha
Helix 87	AJ6	B	929	933	Right-handed 310
Helix 88	AJ7	B	934	943	Right-handed alpha
Helix 89	AJ8	B	965	977	Right-handed alpha
Helix 90	AJ9	B	982	986	Right-handed 310
Helix 91	AK1	B	989	1001	Right-handed alpha
Helix 92	AK2	B	1005	1010	Right-handed alpha
Helix 93	AK3	B	1013	1033	Right-handed alpha
Helix 94	AK4	B	1063	1077	Right-handed alpha
Helix 95	AK5	B	1079	1095	Right-handed alpha
Helix 96	AK6	B	1098	1118	Right-handed alpha
Helix 97	AK7	B	1138	1149	Right-handed alpha
Helix 98	AK8	B	1178	1194	Right-handed alpha

There are 16 sheets in PDB entry 6AC8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	87	90	first strand
Strand 2	A	132	136	parallel
Strand 3	A	62	66	parallel
Strand 4	A	314	317	parallel
Strand 5	A	379	383	parallel
Strand 6	A	41	43	parallel
Strand 7	A	391	392	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	156	first strand
Strand 2	A	237	239	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	179	first strand
Strand 2	A	187	190	parallel
Strand 3	A	194	197	anti-parallel
Strand 4	A	206	210	anti-parallel
Strand 5	A	215	221	anti-parallel
Strand 6	A	228	229	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	396	397	first strand
Strand 2	A	474	476	anti-parallel
Strand 3	A	481	485	anti-parallel
Strand 4	A	424	429	parallel
Strand 5	A	463	467	parallel
Strand 6	A	449	451	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	562	566	first strand
Strand 2	A	543	550	anti-parallel
Strand 3	A	527	538	anti-parallel
Strand 4	A	520	523	anti-parallel
Strand 5	A	573	575	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	722	725	first strand
Strand 2	A	748	751	parallel
Strand 3	A	693	697	parallel
Strand 4	A	765	771	parallel
Strand 5	A	792	797	parallel
Strand 6	A	665	669	parallel
Strand 7	A	814	817	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	829	834	first strand
Strand 2	A	953	958	parallel
Strand 3	A	922	927	parallel
Strand 4	A	853	857	parallel
Strand 5	A	906	909	parallel
Strand 6	A	880	883	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1047	1049	first strand
Strand 2	A	1121	1124	parallel
Strand 3	A	1129	1132	anti-parallel
Strand 4	A	1160	1164	anti-parallel
Strand 5	A	1153	1155	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	90	first strand
Strand 2	B	132	136	parallel
Strand 3	B	62	66	parallel
Strand 4	B	314	317	parallel
Strand 5	B	379	383	parallel
Strand 6	B	41	43	parallel
Strand 7	B	391	392	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	157	first strand
Strand 2	B	236	239	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	177	178	first strand
Strand 2	B	187	190	parallel
Strand 3	B	194	197	anti-parallel
Strand 4	B	206	211	anti-parallel
Strand 5	B	214	220	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	397	first strand
Strand 2	B	474	476	anti-parallel
Strand 3	B	481	485	anti-parallel
Strand 4	B	424	429	parallel
Strand 5	B	463	467	parallel
Strand 6	B	449	451	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	561	565	first strand
Strand 2	B	543	551	anti-parallel
Strand 3	B	527	538	anti-parallel
Strand 4	B	520	523	anti-parallel
Strand 5	B	573	575	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	722	725	first strand
Strand 2	B	748	751	parallel
Strand 3	B	693	697	parallel
Strand 4	B	765	771	parallel
Strand 5	B	792	797	parallel
Strand 6	B	665	669	parallel
Strand 7	B	814	817	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	829	834	first strand
Strand 2	B	953	958	parallel
Strand 3	B	922	927	parallel
Strand 4	B	853	857	parallel
Strand 5	B	906	909	parallel
Strand 6	B	880	883	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1047	1049	first strand
Strand 2	B	1121	1124	parallel
Strand 3	B	1129	1132	anti-parallel
Strand 4	B	1160	1164	anti-parallel
Strand 5	B	1153	1155	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6AC8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6AC8