Analysis of interatomic Contacts of Structural Units in PDB entry:
6ACA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ACA entry

There is 1 chain in PDB entry 6ACA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 7LYS 1205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6ACA. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
13 22Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
45 47Right-handed 310
Helix 4
AA4
A
48 60Right-handed alpha
Helix 5
AA5
A
68 84Right-handed alpha
Helix 6
AA6
A
104 120Right-handed alpha
Helix 7
AA7
A
137 141Right-handed alpha
Helix 8
AA8
A
163 172Right-handed alpha
Helix 9
AA9
A
249 257Right-handed alpha
Helix 10
AB1
A
274 282Right-handed alpha
Helix 11
AB2
A
288 293Right-handed 310
Helix 12
AB3
A
303 307Right-handed 310
Helix 13
AB4
A
318 341Right-handed alpha
Helix 14
AB5
A
367 376Right-handed alpha
Helix 15
AB6
A
407 422Right-handed alpha
Helix 16
AB7
A
434 448Right-handed alpha
Helix 17
AB8
A
480 482Right-handed 310
Helix 18
AB9
A
489 494Right-handed alpha
Helix 19
AC1
A
575 577Right-handed 310
Helix 20
AC2
A
597 607Right-handed alpha
Helix 21
AC3
A
609 626Right-handed alpha
Helix 22
AC4
A
637 642Right-handed alpha
Helix 23
AC5
A
653 666Right-handed alpha
Helix 24
AC6
A
680 696Right-handed alpha
Helix 25
AC7
A
706 721Right-handed alpha
Helix 26
AC8
A
736 749Right-handed alpha
Helix 27
AC9
A
759 763Right-handed 310
Helix 28
AD1
A
779 782Right-handed 310
Helix 29
AD2
A
783 790Right-handed alpha
Helix 30
AD3
A
810 815Right-handed alpha
Helix 31
AD4
A
827 831Right-handed 310
Helix 32
AD5
A
842 856Right-handed alpha
Helix 33
AD6
A
869 881Right-handed alpha
Helix 34
AD7
A
894 907Right-handed alpha
Helix 35
AD8
A
916 921Right-handed alpha
Helix 36
AD9
A
935 939Right-handed 310
Helix 37
AE1
A
940 948Right-handed alpha
Helix 38
AE2
A
949 951Right-handed 310
Helix 39
AE3
A
971 981Right-handed alpha
Helix 40
AE4
A
991 998Right-handed alpha
Helix 41
AE5
A
998 1007Right-handed alpha
Helix 42
AE6
A
1011 1016Right-handed alpha
Helix 43
AE7
A
1019 1038Right-handed alpha
Helix 44
AE8
A
1074 1086Right-handed alpha
Helix 45
AE9
A
1089 1104Right-handed alpha
Helix 46
AF1
A
1108 1126Right-handed alpha
Helix 47
AF2
A
1148 1153Right-handed alpha
Helix 48
AF3
A
1154 1159Right-handed alpha
Helix 49
AF4
A
1187 1204Right-handed alpha
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There are 10 sheets in PDB entry 6ACA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 89first strand
Strand 2
A
132 136parallel
Strand 3
A
63 66parallel
Strand 4
A
314 317parallel
Strand 5
A
383 386parallel
Strand 6
A
42 43parallel
Strand 7
A
394 395parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
154 157first strand
Strand 2
A
236 239anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
177 178first strand
Strand 2
A
187 190parallel
Strand 3
A
194 197anti-parallel
Strand 4
A
206 211anti-parallel
Strand 5
A
214 222anti-parallel
Strand 6
A
227 228anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
427 428first strand
Strand 2
A
484 486parallel
Strand 3
A
477 479anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
431 432first strand
Strand 2
A
467 470parallel
Strand 3
A
453 454parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
568 571first strand
Strand 2
A
549 553anti-parallel
Strand 3
A
530 538anti-parallel
Strand 4
A
523 526anti-parallel
Strand 5
A
579 581anti-parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
730 731first strand
Strand 2
A
754 757parallel
Strand 3
A
700 703parallel
Strand 4
A
773 777parallel
Strand 5
A
798 803parallel
Strand 6
A
672 675parallel
Strand 7
A
820 822parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
835 840first strand
Strand 2
A
959 964parallel
Strand 3
A
930 933parallel
Strand 4
A
860 863parallel
Strand 5
A
912 914parallel
Strand 6
A
886 888parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1057 1058first strand
Strand 2
A
1131 1132parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1139 1141first strand
Strand 2
A
1172 1174anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il