Analysis of interatomic Contacts of Structural Units in PDB entry:
6ACI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ACI entry

There are 2 chains in PDB entry 6ACI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG -1TRP 329
H
 ASP 96GLN 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6ACI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 57Right-handed 310
Helix 2
AA2
A
71 83Right-handed alpha
Helix 3
AA3
A
97 111Right-handed alpha
Helix 4
AA4
A
120 122Right-handed 310
Helix 5
AA5
A
124 128Right-handed 310
Helix 6
AA6
A
130 145Right-handed alpha
Helix 7
AA7
A
146 150Right-handed 310
Helix 8
AA8
A
151 164Right-handed alpha
Helix 9
AA9
A
171 178Right-handed alpha
Helix 10
AB1
A
181 196Right-handed alpha
Helix 11
AB2
A
196 202Right-handed alpha
Helix 12
AB3
A
207 211Right-handed 310
Helix 13
AB4
A
264 275Right-handed alpha
Helix 14
AB5
A
287 295Right-handed alpha
Helix 15
AB6
A
302 311Right-handed alpha
Helix 16
AB7
A
320 325Right-handed 310
Helix 17
AB8
H
97 108Right-handed alpha
Helix 18
AB9
H
111 119Right-handed alpha
Helix 19
AC1
H
122 133Right-handed alpha
Helix 20
AC2
H
136 153Right-handed alpha
Helix 21
AC3
H
154 156Right-handed 310
Helix 22
AC4
H
157 168Right-handed alpha
Helix 23
AC5
H
170 182Right-handed alpha
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There are 4 sheets in PDB entry 6ACI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
32 33anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 39first strand
Strand 2
A
233 236anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 118first strand
Strand 2
A
88 93parallel
Strand 3
A
45 50parallel
Strand 4
A
217 220parallel
Strand 5
A
249 259anti-parallel
Strand 6
A
239 246anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 226first strand
Strand 2
A
317 318anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il