Analysis of interatomic Contacts of Structural Units in PDB entry:
6ACJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ACJ entry

There are 4 chains in PDB entry 6ACJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 18	VAL 1119
B	ARG 18	VAL 1119
C	ARG 18	VAL 1119
D	SER 19	ASP 615

There are 77 helices in PDB entry 6ACJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	281	291	Right-handed alpha
Helix 2	AA2	A	324	329	Right-handed alpha
Helix 3	AA3	A	371	375	Right-handed 310
Helix 4	AA4	A	392	397	Right-handed alpha
Helix 5	AA5	A	404	409	Right-handed alpha
Helix 6	AA6	A	488	492	Right-handed 310
Helix 7	AA7	A	604	611	Right-handed alpha
Helix 8	AA8	A	719	724	Right-handed alpha
Helix 9	AA9	A	729	738	Right-handed alpha
Helix 10	AB1	A	740	765	Right-handed alpha
Helix 11	AB2	A	798	808	Right-handed alpha
Helix 12	AB3	A	848	864	Right-handed alpha
Helix 13	AB4	A	880	888	Right-handed alpha
Helix 14	AB5	A	894	899	Right-handed alpha
Helix 15	AB6	A	901	922	Right-handed alpha
Helix 16	AB7	A	927	950	Right-handed alpha
Helix 17	AB8	A	961	965	Right-handed 310
Helix 18	AB9	A	969	1013	Right-handed alpha
Helix 19	AC1	A	1098	1102	Right-handed 310
Helix 20	AC2	B	281	291	Right-handed alpha
Helix 21	AC3	B	324	329	Right-handed alpha
Helix 22	AC4	B	371	377	Right-handed 310
Helix 23	AC5	B	404	410	Right-handed alpha
Helix 24	AC6	B	488	492	Right-handed 310
Helix 25	AC7	B	604	612	Right-handed alpha
Helix 26	AC8	B	729	738	Right-handed alpha
Helix 27	AC9	B	740	765	Right-handed alpha
Helix 28	AD1	B	798	808	Right-handed alpha
Helix 29	AD2	B	848	864	Right-handed alpha
Helix 30	AD3	B	880	888	Right-handed alpha
Helix 31	AD4	B	901	920	Right-handed alpha
Helix 32	AD5	B	927	949	Right-handed alpha
Helix 33	AD6	B	960	966	Right-handed alpha
Helix 34	AD7	B	969	1017	Right-handed alpha
Helix 35	AD8	C	281	291	Right-handed alpha
Helix 36	AD9	C	352	357	Right-handed alpha
Helix 37	AE1	C	390	394	Right-handed 310
Helix 38	AE2	C	404	409	Right-handed alpha
Helix 39	AE3	C	603	611	Right-handed alpha
Helix 40	AE4	C	729	737	Right-handed alpha
Helix 41	AE5	C	740	764	Right-handed alpha
Helix 42	AE6	C	798	806	Right-handed alpha
Helix 43	AE7	C	848	865	Right-handed alpha
Helix 44	AE8	C	880	888	Right-handed alpha
Helix 45	AE9	C	901	922	Right-handed alpha
Helix 46	AF1	C	927	950	Right-handed alpha
Helix 47	AF2	C	961	966	Right-handed 310
Helix 48	AF3	C	969	1013	Right-handed alpha
Helix 49	AF4	D	20	53	Right-handed alpha
Helix 50	AF5	D	55	63	Right-handed alpha
Helix 51	AF6	D	63	81	Right-handed alpha
Helix 52	AF7	D	93	102	Right-handed alpha
Helix 53	AF8	D	109	130	Right-handed alpha
Helix 54	AF9	D	150	155	Right-handed alpha
Helix 55	AG1	D	157	172	Right-handed alpha
Helix 56	AG2	D	172	194	Right-handed alpha
Helix 57	AG3	D	198	205	Right-handed alpha
Helix 58	AG4	D	219	231	Right-handed alpha
Helix 59	AG5	D	232	252	Right-handed alpha
Helix 60	AG6	D	275	279	Right-handed 310
Helix 61	AG7	D	293	300	Right-handed alpha
Helix 62	AG8	D	303	318	Right-handed alpha
Helix 63	AG9	D	324	331	Right-handed alpha
Helix 64	AH1	D	365	385	Right-handed alpha
Helix 65	AH2	D	386	388	Right-handed 310
Helix 66	AH3	D	398	413	Right-handed alpha
Helix 67	AH4	D	414	422	Right-handed alpha
Helix 68	AH5	D	431	466	Right-handed alpha
Helix 69	AH6	D	472	484	Right-handed alpha
Helix 70	AH7	D	503	508	Right-handed alpha
Helix 71	AH8	D	512	533	Right-handed alpha
Helix 72	AH9	D	538	542	Right-handed 310
Helix 73	AI1	D	548	559	Right-handed alpha
Helix 74	AI2	D	560	564	Right-handed 310
Helix 75	AI3	D	565	575	Right-handed alpha
Helix 76	AI4	D	581	599	Right-handed alpha
Helix 77	AI5	D	600	602	Right-handed 310

There are 43 sheets in PDB entry 6ACJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	65	71	anti-parallel
Strand 3	A	250	256	anti-parallel
Strand 4	A	87	93	anti-parallel
Strand 5	A	179	190	anti-parallel
Strand 6	A	200	203	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	34	first strand
Strand 2	A	65	71	anti-parallel
Strand 3	A	250	256	anti-parallel
Strand 4	A	87	93	anti-parallel
Strand 5	A	179	190	anti-parallel
Strand 6	A	193	198	anti-parallel
Strand 7	A	217	222	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	59	first strand
Strand 2	A	258	266	anti-parallel
Strand 3	A	272	277	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	230	233	anti-parallel
Strand 3	A	101	104	anti-parallel
Strand 4	A	112	118	anti-parallel
Strand 5	A	123	129	anti-parallel
Strand 6	A	161	164	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	138	140	first strand
Strand 2	A	236	238	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	306	first strand
Strand 2	A	578	584	anti-parallel
Strand 3	A	595	597	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	312	first strand
Strand 2	A	525	528	parallel
Strand 3	A	533	540	anti-parallel
Strand 4	A	569	573	anti-parallel
Strand 5	A	561	563	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	341	345	first strand
Strand 2	A	382	389	anti-parallel
Strand 3	A	494	500	anti-parallel
Strand 4	A	419	424	anti-parallel
Strand 5	A	363	366	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	439	440	first strand
Strand 2	A	479	480	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	650	651	first strand
Strand 2	A	657	658	anti-parallel
Strand 3	A	676	677	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	710	first strand
Strand 2	A	1041	1047	anti-parallel
Strand 3	A	1032	1034	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	705	710	first strand
Strand 2	A	1041	1047	anti-parallel
Strand 3	A	1037	1038	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	716	718	first strand
Strand 2	A	840	842	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1069	1070	first strand
Strand 2	A	1104	1105	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1078	1079	first strand
Strand 2	A	1085	1087	anti-parallel
Strand 3	A	1094	1096	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	34	first strand
Strand 2	B	65	71	anti-parallel
Strand 3	B	250	256	anti-parallel
Strand 4	B	87	92	anti-parallel
Strand 5	B	183	190	anti-parallel
Strand 6	B	193	198	anti-parallel
Strand 7	B	217	223	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	59	first strand
Strand 2	B	258	266	anti-parallel
Strand 3	B	272	277	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	230	232	anti-parallel
Strand 3	B	101	104	anti-parallel
Strand 4	B	112	118	anti-parallel
Strand 5	B	122	130	anti-parallel
Strand 6	B	156	167	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	141	first strand
Strand 2	B	235	239	parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	304	first strand
Strand 2	B	578	585	anti-parallel
Strand 3	B	595	600	anti-parallel
Strand 4	B	636	637	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	525	528	parallel
Strand 3	B	533	540	anti-parallel
Strand 4	B	568	573	anti-parallel
Strand 5	B	561	564	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	341	345	first strand
Strand 2	B	380	389	anti-parallel
Strand 3	B	494	502	anti-parallel
Strand 4	B	419	424	anti-parallel
Strand 5	B	363	366	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	657	658	first strand
Strand 2	B	676	677	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	700	701	first strand
Strand 2	B	1050	1051	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	708	710	first strand
Strand 2	B	1041	1043	anti-parallel
Strand 3	B	1036	1037	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	716	718	first strand
Strand 2	B	840	842	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1032	1033	first strand
Strand 2	B	1046	1047	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	31	34	first strand
Strand 2	C	65	68	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	59	first strand
Strand 2	C	258	266	anti-parallel
Strand 3	C	272	277	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	230	233	anti-parallel
Strand 3	C	101	104	anti-parallel
Strand 4	C	113	118	anti-parallel
Strand 5	C	123	127	anti-parallel
Strand 6	C	161	164	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	217	222	first strand
Strand 2	C	193	198	anti-parallel
Strand 3	C	181	190	anti-parallel
Strand 4	C	87	93	anti-parallel
Strand 5	C	251	256	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	300	301	first strand
Strand 2	C	581	584	anti-parallel
Strand 3	C	595	598	anti-parallel
Strand 4	C	635	637	anti-parallel
Strand 5	C	627	629	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	314	first strand
Strand 2	C	525	528	parallel
Strand 3	C	535	536	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	345	first strand
Strand 2	C	380	389	anti-parallel
Strand 3	C	494	502	anti-parallel
Strand 4	C	419	424	anti-parallel
Strand 5	C	363	366	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	348	349	first strand
Strand 2	C	510	511	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	439	441	first strand
Strand 2	C	478	480	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	540	first strand
Strand 2	C	569	572	anti-parallel
Strand 3	C	561	563	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	700	710	first strand
Strand 2	C	1041	1051	anti-parallel
Strand 3	C	1032	1037	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	841	842	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1078	1079	first strand
Strand 2	C	1085	1086	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	133	first strand
Strand 2	D	141	142	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	262	263	first strand
Strand 2	D	487	488	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	356	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ACJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ACJ