Analysis of interatomic Contacts of Structural Units in PDB entry:
6ACS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ACS entry

There are 2 chains in PDB entry 6ACS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3GLU 240
B
 GLU 6HIS 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6ACS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 23Right-handed 310
Helix 2
AA2
A
41 53Right-handed alpha
Helix 3
AA3
A
70 95Right-handed alpha
Helix 4
AA4
A
109 124Right-handed alpha
Helix 5
AA5
A
138 156Right-handed alpha
Helix 6
AA6
A
160 164Right-handed 310
Helix 7
AA7
A
165 171Right-handed alpha
Helix 8
AA8
A
212 216Right-handed 310
Helix 9
AA9
A
217 236Right-handed alpha
Helix 10
AB1
B
41 53Right-handed alpha
Helix 11
AB2
B
70 96Right-handed alpha
Helix 12
AB3
B
109 124Right-handed alpha
Helix 13
AB4
B
138 156Right-handed alpha
Helix 14
AB5
B
160 164Right-handed 310
Helix 15
AB6
B
165 171Right-handed alpha
Helix 16
AB7
B
212 216Right-handed 310
Helix 17
AB8
B
217 236Right-handed alpha
Helix 18
AB9
B
238 253Right-handed alpha
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There are 2 sheets in PDB entry 6ACS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 102first strand
Strand 2
A
129 134parallel
Strand 3
A
56 61parallel
Strand 4
A
12 17parallel
Strand 5
A
183 186parallel
Strand 6
A
205 208parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 102first strand
Strand 2
B
129 134parallel
Strand 3
B
56 61parallel
Strand 4
B
12 17parallel
Strand 5
B
183 186parallel
Strand 6
B
205 208parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il