Analysis of interatomic Contacts of Structural Units in PDB entry:
6AD3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AD3 entry

There is 1 chain in PDB entry 6AD3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 50ALA 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6AD3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 72Right-handed alpha
Helix 2
AA2
A
74 79Right-handed 310
Helix 3
AA3
A
91 106Right-handed alpha
Helix 4
AA4
A
107 109Right-handed 310
Helix 5
AA5
A
144 157Right-handed alpha
Helix 6
AA6
A
161 165Right-handed 310
Helix 7
AA7
A
188 191Right-handed 310
Helix 8
AA8
A
192 208Right-handed alpha
Helix 9
AA9
A
218 232Right-handed alpha
Helix 10
AB1
A
235 247Right-handed alpha
Helix 11
AB2
A
289 303Right-handed alpha
Helix 12
AB3
A
306 324Right-handed alpha
Helix 13
AB4
A
339 345Right-handed alpha
Helix 14
AB5
A
365 382Right-handed alpha
Helix 15
AB6
A
387 395Right-handed alpha
Helix 16
AB7
A
423 428Right-handed 310
Helix 17
AB8
A
474 493Right-handed alpha
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There are 3 sheets in PDB entry 6AD3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
125 130anti-parallel
Strand 3
A
111 115anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 141first strand
Strand 2
A
168 175parallel
Strand 3
A
179 186anti-parallel
Strand 4
A
80 87anti-parallel
Strand 5
A
433 440anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 287first strand
Strand 2
A
461 467anti-parallel
Strand 3
A
448 453anti-parallel
Strand 4
A
415 420parallel
Strand 5
A
328 334parallel
Strand 6
A
351 357anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il