Analysis of interatomic Contacts of Structural Units in PDB entry:
6ADQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6ADQ entry

There are 24 chains in PDB entry 6ADQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	TRP 27	GLN 338
F	GLU 10	GLY 561
G	MET 1	ARG 203
H	MET 1	HIS 139
I	MET 1	TRP 79
J	GLU 13	ALA 157
D	MET 1	ARG 100
Y	CYS 21	GLY 236
K	CYS 24	GLY 182
B	ASP 4	GLY 538
C	GLN 72	ALA 294
A	GLY 40	SER 421
Q	TRP 27	GLN 338
R	GLU 10	GLY 561
S	MET 1	ARG 203
T	MET 1	HIS 139
U	MET 1	TRP 79
V	GLU 13	ALA 157
P	MET 1	ARG 100
Z	CYS 21	GLY 236
W	CYS 24	GLY 182
N	ASP 4	GLY 538
O	GLN 72	ALA 294
M	GLY 40	SER 421

There are172 helices in PDB entry 6ADQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	27	32	Right-handed alpha
Helix 2	AA2	E	40	72	Right-handed alpha
Helix 3	AA3	E	91	118	Right-handed alpha
Helix 4	AA4	E	236	240	Right-handed 310
Helix 5	AA5	E	292	301	Right-handed alpha
Helix 6	AA6	E	308	315	Right-handed alpha
Helix 7	AA7	F	27	33	Right-handed alpha
Helix 8	AA8	F	36	66	Right-handed alpha
Helix 9	AA9	F	75	92	Right-handed alpha
Helix 10	AB1	F	94	112	Right-handed alpha
Helix 11	AB2	F	120	138	Right-handed alpha
Helix 12	AB3	F	154	159	Right-handed alpha
Helix 13	AB4	F	165	196	Right-handed alpha
Helix 14	AB5	F	207	240	Right-handed alpha
Helix 15	AB6	F	252	286	Right-handed alpha
Helix 16	AB7	F	292	309	Right-handed alpha
Helix 17	AB8	F	322	348	Right-handed alpha
Helix 18	AB9	F	356	380	Right-handed alpha
Helix 19	AC1	F	381	386	Right-handed alpha
Helix 20	AC2	F	391	418	Right-handed alpha
Helix 21	AC3	F	427	447	Right-handed alpha
Helix 22	AC4	F	448	455	Right-handed alpha
Helix 23	AC5	F	470	486	Right-handed alpha
Helix 24	AC6	F	488	500	Right-handed alpha
Helix 25	AC7	F	540	547	Right-handed alpha
Helix 26	AC8	F	550	557	Right-handed alpha
Helix 27	AC9	G	23	49	Right-handed alpha
Helix 28	AD1	G	69	93	Right-handed alpha
Helix 29	AD2	G	95	126	Right-handed alpha
Helix 30	AD3	G	134	144	Right-handed alpha
Helix 31	AD4	G	144	168	Right-handed alpha
Helix 32	AD5	G	171	200	Right-handed alpha
Helix 33	AD6	H	2	28	Right-handed alpha
Helix 34	AD7	H	38	62	Right-handed alpha
Helix 35	AD8	H	74	78	Right-handed 310
Helix 36	AD9	H	91	108	Right-handed alpha
Helix 37	AE1	H	110	130	Right-handed alpha
Helix 38	AE2	I	2	26	Right-handed alpha
Helix 39	AE3	J	46	57	Right-handed alpha
Helix 40	AE4	J	76	83	Right-handed alpha
Helix 41	AE5	J	121	135	Right-handed alpha
Helix 42	AE6	J	138	154	Right-handed alpha
Helix 43	AE7	D	44	62	Right-handed alpha
Helix 44	AE8	D	70	97	Right-handed alpha
Helix 45	AE9	Y	176	181	Right-handed alpha
Helix 46	AF1	Y	215	221	Right-handed alpha
Helix 47	AF2	B	6	20	Right-handed alpha
Helix 48	AF3	B	23	28	Right-handed alpha
Helix 49	AF4	B	37	40	Right-handed 310
Helix 50	AF5	B	41	62	Right-handed alpha
Helix 51	AF6	B	87	98	Right-handed alpha
Helix 52	AF7	B	101	130	Right-handed alpha
Helix 53	AF8	B	134	136	Right-handed 310
Helix 54	AF9	B	137	160	Right-handed alpha
Helix 55	AG1	B	164	181	Right-handed alpha
Helix 56	AG2	B	185	195	Right-handed alpha
Helix 57	AG3	B	203	213	Right-handed alpha
Helix 58	AG4	B	213	232	Right-handed alpha
Helix 59	AG5	B	256	278	Right-handed alpha
Helix 60	AG6	B	302	315	Right-handed alpha
Helix 61	AG7	B	329	345	Right-handed alpha
Helix 62	AG8	B	346	355	Right-handed alpha
Helix 63	AG9	B	370	390	Right-handed alpha
Helix 64	AH1	B	392	400	Right-handed alpha
Helix 65	AH2	B	403	437	Right-handed alpha
Helix 66	AH3	B	438	443	Right-handed alpha
Helix 67	AH4	B	487	491	Right-handed 310
Helix 68	AH5	B	507	537	Right-handed alpha
Helix 69	AH6	C	73	85	Right-handed alpha
Helix 70	AH7	C	87	92	Right-handed alpha
Helix 71	AH8	C	108	119	Right-handed alpha
Helix 72	AH9	C	139	154	Right-handed alpha
Helix 73	AI1	C	177	188	Right-handed alpha
Helix 74	AI2	C	214	224	Right-handed alpha
Helix 75	AI3	C	238	250	Right-handed alpha
Helix 76	AI4	C	267	277	Right-handed alpha
Helix 77	AI5	C	279	291	Right-handed alpha
Helix 78	AI6	A	44	48	Right-handed 310
Helix 79	AI7	A	51	64	Right-handed alpha
Helix 80	AI8	A	79	109	Right-handed alpha
Helix 81	AI9	A	121	127	Right-handed alpha
Helix 82	AJ1	A	127	152	Right-handed alpha
Helix 83	AJ2	A	170	187	Right-handed alpha
Helix 84	AJ3	A	193	217	Right-handed alpha
Helix 85	AJ4	A	301	307	Right-handed alpha
Helix 86	AJ5	A	318	322	Right-handed 310
Helix 87	AJ6	Q	28	32	Right-handed alpha
Helix 88	AJ7	Q	40	72	Right-handed alpha
Helix 89	AJ8	Q	91	118	Right-handed alpha
Helix 90	AJ9	Q	236	240	Right-handed 310
Helix 91	AK1	Q	292	301	Right-handed alpha
Helix 92	AK2	Q	308	315	Right-handed alpha
Helix 93	AK3	R	27	33	Right-handed alpha
Helix 94	AK4	R	36	66	Right-handed alpha
Helix 95	AK5	R	75	92	Right-handed alpha
Helix 96	AK6	R	94	112	Right-handed alpha
Helix 97	AK7	R	120	138	Right-handed alpha
Helix 98	AK8	R	154	159	Right-handed alpha
Helix 99	AK9	R	165	196	Right-handed alpha
Helix 100	AL1	R	207	240	Right-handed alpha
Helix 101	AL2	R	252	286	Right-handed alpha
Helix 102	AL3	R	292	309	Right-handed alpha
Helix 103	AL4	R	322	348	Right-handed alpha
Helix 104	AL5	R	356	380	Right-handed alpha
Helix 105	AL6	R	381	386	Right-handed alpha
Helix 106	AL7	R	391	418	Right-handed alpha
Helix 107	AL8	R	427	447	Right-handed alpha
Helix 108	AL9	R	447	455	Right-handed alpha
Helix 109	AM1	R	470	486	Right-handed alpha
Helix 110	AM2	R	488	500	Right-handed alpha
Helix 111	AM3	R	540	547	Right-handed alpha
Helix 112	AM4	R	550	557	Right-handed alpha
Helix 113	AM5	S	23	49	Right-handed alpha
Helix 114	AM6	S	69	93	Right-handed alpha
Helix 115	AM7	S	95	126	Right-handed alpha
Helix 116	AM8	S	134	144	Right-handed alpha
Helix 117	AM9	S	144	168	Right-handed alpha
Helix 118	AN1	S	171	200	Right-handed alpha
Helix 119	AN2	T	2	28	Right-handed alpha
Helix 120	AN3	T	38	62	Right-handed alpha
Helix 121	AN4	T	74	78	Right-handed 310
Helix 122	AN5	T	91	108	Right-handed alpha
Helix 123	AN6	T	110	130	Right-handed alpha
Helix 124	AN7	U	2	26	Right-handed alpha
Helix 125	AN8	V	46	57	Right-handed alpha
Helix 126	AN9	V	76	83	Right-handed alpha
Helix 127	AO1	V	121	135	Right-handed alpha
Helix 128	AO2	V	138	154	Right-handed alpha
Helix 129	AO3	P	44	62	Right-handed alpha
Helix 130	AO4	P	70	97	Right-handed alpha
Helix 131	AO5	Z	176	181	Right-handed alpha
Helix 132	AO6	Z	215	221	Right-handed alpha
Helix 133	AO7	N	6	20	Right-handed alpha
Helix 134	AO8	N	23	28	Right-handed alpha
Helix 135	AO9	N	37	40	Right-handed 310
Helix 136	AP1	N	41	62	Right-handed alpha
Helix 137	AP2	N	87	98	Right-handed alpha
Helix 138	AP3	N	101	130	Right-handed alpha
Helix 139	AP4	N	134	136	Right-handed 310
Helix 140	AP5	N	137	160	Right-handed alpha
Helix 141	AP6	N	164	181	Right-handed alpha
Helix 142	AP7	N	185	195	Right-handed alpha
Helix 143	AP8	N	203	213	Right-handed alpha
Helix 144	AP9	N	213	232	Right-handed alpha
Helix 145	AQ1	N	256	278	Right-handed alpha
Helix 146	AQ2	N	302	315	Right-handed alpha
Helix 147	AQ3	N	329	345	Right-handed alpha
Helix 148	AQ4	N	346	355	Right-handed alpha
Helix 149	AQ5	N	370	390	Right-handed alpha
Helix 150	AQ6	N	392	400	Right-handed alpha
Helix 151	AQ7	N	403	437	Right-handed alpha
Helix 152	AQ8	N	438	443	Right-handed alpha
Helix 153	AQ9	N	487	491	Right-handed 310
Helix 154	AR1	N	507	537	Right-handed alpha
Helix 155	AR2	O	73	85	Right-handed alpha
Helix 156	AR3	O	87	92	Right-handed alpha
Helix 157	AR4	O	108	119	Right-handed alpha
Helix 158	AR5	O	139	154	Right-handed alpha
Helix 159	AR6	O	177	188	Right-handed alpha
Helix 160	AR7	O	214	224	Right-handed alpha
Helix 161	AR8	O	238	250	Right-handed alpha
Helix 162	AR9	O	267	277	Right-handed alpha
Helix 163	AS1	O	279	291	Right-handed alpha
Helix 164	AS2	M	44	48	Right-handed 310
Helix 165	AS3	M	51	64	Right-handed alpha
Helix 166	AS4	M	79	109	Right-handed alpha
Helix 167	AS5	M	121	127	Right-handed alpha
Helix 168	AS6	M	127	152	Right-handed alpha
Helix 169	AS7	M	170	187	Right-handed alpha
Helix 170	AS8	M	193	217	Right-handed alpha
Helix 171	AS9	M	301	307	Right-handed alpha
Helix 172	AT1	M	318	322	Right-handed 310

There are 33 sheets in PDB entry 6ADQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	147	first strand
Strand 2	E	129	136	anti-parallel
Strand 3	E	139	142	anti-parallel
Strand 4	E	203	204	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	147	first strand
Strand 2	E	129	136	anti-parallel
Strand 3	E	221	226	parallel
Strand 4	E	258	260	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	216	first strand
Strand 2	E	286	291	parallel
Strand 3	E	270	273	anti-parallel
Strand 4	E	232	235	anti-parallel
Strand 5	E	244	245	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	48	49	first strand
Strand 2	J	68	69	anti-parallel
Strand 3	J	96	99	parallel
Strand 4	J	106	109	anti-parallel
Strand 5	I	76	77	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	21	22	first strand
Strand 2	J	28	29	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	72	73	first strand
Strand 2	Y	79	87	anti-parallel
Strand 3	Y	92	98	anti-parallel
Strand 4	Y	168	172	anti-parallel
Strand 5	Z	168	172	anti-parallel
Strand 6	Z	92	98	anti-parallel
Strand 7	Z	79	87	anti-parallel
Strand 8	Z	72	73	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	154	157	first strand
Strand 2	Y	110	114	anti-parallel
Strand 3	Y	187	191	anti-parallel
Strand 4	Y	227	232	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	44	first strand
Strand 2	K	49	57	anti-parallel
Strand 3	K	70	79	anti-parallel
Strand 4	K	136	138	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	44	first strand
Strand 2	K	49	57	anti-parallel
Strand 3	K	164	167	parallel
Strand 4	K	148	149	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	152	154	first strand
Strand 2	K	159	161	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	34	first strand
Strand 2	B	247	252	anti-parallel
Strand 3	A	157	163	anti-parallel
Strand 4	A	65	71	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	72	first strand
Strand 2	B	84	86	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	200	first strand
Strand 2	C	206	207	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	228	229	first strand
Strand 2	A	234	235	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	267	first strand
Strand 2	A	252	257	anti-parallel
Strand 3	A	281	286	anti-parallel
Strand 4	A	312	316	anti-parallel
Strand 5	A	339	343	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	357	first strand
Strand 2	A	362	364	anti-parallel
Strand 3	A	371	373	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	396	first strand
Strand 2	A	402	404	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	146	147	first strand
Strand 2	Q	129	136	anti-parallel
Strand 3	Q	139	142	anti-parallel
Strand 4	Q	203	204	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	146	147	first strand
Strand 2	Q	129	136	anti-parallel
Strand 3	Q	221	226	parallel
Strand 4	Q	258	260	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	212	216	first strand
Strand 2	Q	286	291	parallel
Strand 3	Q	270	273	anti-parallel
Strand 4	Q	232	235	anti-parallel
Strand 5	Q	244	245	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	48	49	first strand
Strand 2	V	68	69	anti-parallel
Strand 3	V	96	99	parallel
Strand 4	V	106	109	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	21	22	first strand
Strand 2	V	28	29	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	154	157	first strand
Strand 2	Z	110	114	anti-parallel
Strand 3	Z	187	191	anti-parallel
Strand 4	Z	227	232	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	42	44	first strand
Strand 2	W	49	57	anti-parallel
Strand 3	W	70	79	anti-parallel
Strand 4	W	136	138	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	42	44	first strand
Strand 2	W	49	57	anti-parallel
Strand 3	W	164	167	parallel
Strand 4	W	148	149	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	152	154	first strand
Strand 2	W	159	161	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	33	34	first strand
Strand 2	N	247	252	anti-parallel
Strand 3	M	157	163	anti-parallel
Strand 4	M	65	71	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	70	72	first strand
Strand 2	N	84	86	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	199	200	first strand
Strand 2	O	206	207	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	228	229	first strand
Strand 2	M	234	235	anti-parallel

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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	266	267	first strand
Strand 2	M	252	257	anti-parallel
Strand 3	M	281	286	anti-parallel
Strand 4	M	312	316	anti-parallel
Strand 5	M	339	343	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	355	357	first strand
Strand 2	M	362	364	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	394	396	first strand
Strand 2	M	402	404	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6ADQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6ADQ