Analysis of interatomic Contacts of Structural Units in PDB entry:
6AEL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AEL entry

There is 1 chain in PDB entry 6AEL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 170GLN 903
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6AEL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
203 211Right-handed alpha
Helix 2
AA2
A
214 224Right-handed alpha
Helix 3
AA3
A
237 248Right-handed alpha
Helix 4
AA4
A
250 255Right-handed alpha
Helix 5
AA5
A
274 283Right-handed 310
Helix 6
AA6
A
287 295Right-handed alpha
Helix 7
AA7
A
327 339Right-handed alpha
Helix 8
AA8
A
357 365Right-handed alpha
Helix 9
AA9
A
368 392Right-handed alpha
Helix 10
AB1
A
419 424Right-handed alpha
Helix 11
AB2
A
452 460Right-handed alpha
Helix 12
AB3
A
475 477Right-handed 310
Helix 13
AB4
A
478 482Right-handed 310
Helix 14
AB5
A
523 527Right-handed 310
Helix 15
AB6
A
550 560Right-handed alpha
Helix 16
AB7
A
573 577Right-handed 310
Helix 17
AB8
A
631 637Right-handed alpha
Helix 18
AB9
A
701 704Right-handed 310
Helix 19
AC1
A
705 710Right-handed alpha
Helix 20
AC2
A
733 740Right-handed 310
Helix 21
AC3
A
746 759Right-handed alpha
Helix 22
AC4
A
759 769Right-handed alpha
Helix 23
AC5
A
789 797Right-handed alpha
Helix 24
AC6
A
844 848Right-handed 310
Helix 25
AC7
A
856 865Right-handed alpha
Helix 26
AC8
A
868 877Right-handed alpha
Helix 27
AC9
A
887 897Right-handed alpha
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There are 10 sheets in PDB entry 6AEL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 319first strand
Strand 2
A
299 302parallel
Strand 3
A
349 354parallel
Strand 4
A
194 199parallel
Strand 5
A
399 403parallel
Strand 6
A
530 533anti-parallel
Strand 7
A
225 227anti-parallel
Strand 8
A
541 543parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
546 547parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 263first strand
Strand 2
A
268 270anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 410first strand
Strand 2
A
515 516anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
416 418first strand
Strand 2
A
501 503parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 432first strand
Strand 2
A
438 441anti-parallel
Strand 3
A
492 496anti-parallel
Strand 4
A
469 473anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
592 594first strand
Strand 2
A
650 655parallel
Strand 3
A
660 664anti-parallel
Strand 4
A
669 677anti-parallel
Strand 5
A
771 778anti-parallel
Strand 6
A
810 818anti-parallel
Strand 7
A
831 839anti-parallel
Strand 8
A
866 867anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
643 644first strand
Strand 2
A
878 879anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
716 719first strand
Strand 2
A
742 745anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
798 800first strand
Strand 2
A
803 805anti-parallel
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