Analysis of interatomic Contacts of Structural Units in PDB entry:
6AF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AF0 entry

There are 3 chains in PDB entry 6AF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 30GLU 964
P
 MET 13PRO 119
C
 THR 164VAL 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6AF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 71Right-handed alpha
Helix 2
AA2
A
74 88Right-handed alpha
Helix 3
AA3
A
90 105Right-handed alpha
Helix 4
AA4
A
109 130Right-handed alpha
Helix 5
AA5
A
145 164Right-handed alpha
Helix 6
AA6
A
167 184Right-handed alpha
Helix 7
AA7
A
196 217Right-handed alpha
Helix 8
AA8
A
220 234Right-handed alpha
Helix 9
AA9
A
236 251Right-handed alpha
Helix 10
AB1
A
259 269Right-handed alpha
Helix 11
AB2
A
272 287Right-handed alpha
Helix 12
AB3
A
290 308Right-handed alpha
Helix 13
AB4
A
312 325Right-handed alpha
Helix 14
AB5
A
325 334Right-handed alpha
Helix 15
AB6
A
337 351Right-handed alpha
Helix 16
AB7
A
353 367Right-handed alpha
Helix 17
AB8
A
370 389Right-handed alpha
Helix 18
AB9
A
390 405Right-handed alpha
Helix 19
AC1
A
412 425Right-handed alpha
Helix 20
AC2
A
428 443Right-handed alpha
Helix 21
AC3
A
445 464Right-handed alpha
Helix 22
AC4
A
472 492Right-handed alpha
Helix 23
AC5
A
500 513Right-handed alpha
Helix 24
AC6
A
515 533Right-handed alpha
Helix 25
AC7
A
558 572Right-handed alpha
Helix 26
AC8
A
574 595Right-handed alpha
Helix 27
AC9
A
600 620Right-handed alpha
Helix 28
AD1
A
621 636Right-handed alpha
Helix 29
AD2
A
639 654Right-handed alpha
Helix 30
AD3
A
657 670Right-handed alpha
Helix 31
AD4
A
673 691Right-handed alpha
Helix 32
AD5
A
701 713Right-handed alpha
Helix 33
AD6
A
716 733Right-handed alpha
Helix 34
AD7
A
739 763Right-handed alpha
Helix 35
AD8
A
766 781Right-handed alpha
Helix 36
AD9
A
783 799Right-handed alpha
Helix 37
AE1
A
800 814Right-handed alpha
Helix 38
AE2
A
816 830Right-handed alpha
Helix 39
AE3
A
836 855Right-handed alpha
Helix 40
AE4
A
856 874Right-handed alpha
Helix 41
AE5
A
877 898Right-handed alpha
Helix 42
AE6
A
899 903Right-handed 310
Helix 43
AE7
A
904 928Right-handed alpha
Helix 44
AE8
A
934 963Right-handed alpha
Helix 45
AE9
P
47 52Right-handed 310
Helix 46
AF1
P
53 62Right-handed alpha
Helix 47
AF2
P
90 94Right-handed 310
Helix 48
AF3
P
106 111Right-handed alpha
Helix 49
AF4
P
112 117Right-handed 310
Helix 50
AF5
C
166 175Right-handed alpha
Helix 51
AF6
C
181 186Right-handed alpha
Helix 52
AF7
C
195 202Right-handed alpha
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There are 2 sheets in PDB entry 6AF0. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
50 53anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
37 38first strand
Strand 2
C
176 177anti-parallel
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