Analysis of interatomic Contacts of Structural Units in PDB entry:
6AH5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6AH5 entry

There are 3 chains in PDB entry 6AH5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 7	GLU 363
B	PHE 7	GLU 363
C	PHE 7	GLU 363

There are 37 helices in PDB entry 6AH5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	41	Right-handed alpha
Helix 2	AA2	A	76	80	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	165	170	Right-handed 310
Helix 5	AA5	A	196	203	Right-handed alpha
Helix 6	AA6	A	218	225	Right-handed alpha
Helix 7	AA7	A	228	236	Right-handed alpha
Helix 8	AA8	A	252	256	Right-handed 310
Helix 9	AA9	A	266	270	Right-handed 310
Helix 10	AB1	A	317	332	Right-handed alpha
Helix 11	AB2	A	335	346	Right-handed alpha
Helix 12	AB3	A	349	357	Right-handed alpha
Helix 13	AB4	B	20	41	Right-handed alpha
Helix 14	AB5	B	76	80	Right-handed alpha
Helix 15	AB6	B	111	115	Right-handed 310
Helix 16	AB7	B	165	170	Right-handed 310
Helix 17	AB8	B	196	203	Right-handed alpha
Helix 18	AB9	B	218	225	Right-handed alpha
Helix 19	AC1	B	228	236	Right-handed alpha
Helix 20	AC2	B	252	256	Right-handed 310
Helix 21	AC3	B	266	270	Right-handed 310
Helix 22	AC4	B	317	332	Right-handed alpha
Helix 23	AC5	B	335	346	Right-handed alpha
Helix 24	AC6	B	349	357	Right-handed alpha
Helix 25	AC7	C	20	41	Right-handed alpha
Helix 26	AC8	C	76	80	Right-handed alpha
Helix 27	AC9	C	111	115	Right-handed 310
Helix 28	AD1	C	165	170	Right-handed 310
Helix 29	AD2	C	182	185	Right-handed 310
Helix 30	AD3	C	196	203	Right-handed alpha
Helix 31	AD4	C	218	225	Right-handed alpha
Helix 32	AD5	C	228	236	Right-handed alpha
Helix 33	AD6	C	252	256	Right-handed 310
Helix 34	AD7	C	266	270	Right-handed 310
Helix 35	AD8	C	317	332	Right-handed alpha
Helix 36	AD9	C	335	346	Right-handed alpha
Helix 37	AE1	C	349	357	Right-handed alpha

There are 21 sheets in PDB entry 6AH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	13	first strand
Strand 2	B	15	17	anti-parallel
Strand 3	C	358	360	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	358	361	first strand
Strand 2	A	15	18	parallel
Strand 3	C	10	13	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	53	first strand
Strand 2	A	293	316	anti-parallel
Strand 3	A	279	287	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	81	82	first strand
Strand 2	A	89	108	anti-parallel
Strand 3	A	145	153	anti-parallel
Strand 4	A	132	139	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	139	first strand
Strand 2	A	145	153	anti-parallel
Strand 3	A	89	108	anti-parallel
Strand 4	A	293	316	anti-parallel
Strand 5	A	237	248	parallel
Strand 6	A	259	264	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	65	first strand
Strand 2	A	172	181	anti-parallel
Strand 3	A	186	189	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	57	65	first strand
Strand 2	A	172	181	anti-parallel
Strand 3	A	215	217	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	70	first strand
Strand 2	A	73	75	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	360	first strand
Strand 2	C	15	18	parallel
Strand 3	B	10	13	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	53	first strand
Strand 2	B	293	316	anti-parallel
Strand 3	B	279	287	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	81	82	first strand
Strand 2	B	89	108	anti-parallel
Strand 3	B	145	153	anti-parallel
Strand 4	B	132	139	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	132	139	first strand
Strand 2	B	145	153	anti-parallel
Strand 3	B	89	108	anti-parallel
Strand 4	B	293	316	anti-parallel
Strand 5	B	237	248	parallel
Strand 6	B	259	264	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	65	first strand
Strand 2	B	172	181	anti-parallel
Strand 3	B	186	189	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	57	65	first strand
Strand 2	B	172	181	anti-parallel
Strand 3	B	215	217	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	70	first strand
Strand 2	B	73	75	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	53	first strand
Strand 2	C	293	316	anti-parallel
Strand 3	C	279	287	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	81	82	first strand
Strand 2	C	89	108	anti-parallel
Strand 3	C	145	153	anti-parallel
Strand 4	C	132	139	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	132	139	first strand
Strand 2	C	145	153	anti-parallel
Strand 3	C	89	108	anti-parallel
Strand 4	C	293	316	anti-parallel
Strand 5	C	237	248	parallel
Strand 6	C	259	264	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	65	first strand
Strand 2	C	172	181	anti-parallel
Strand 3	C	186	189	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	65	first strand
Strand 2	C	172	181	anti-parallel
Strand 3	C	215	217	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	68	70	first strand
Strand 2	C	73	75	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6AH5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6AH5