Analysis of interatomic Contacts of Structural Units in PDB entry:
6AHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AHV entry

There is 1 chain in PDB entry 6AHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 12GLY 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6AHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 35Right-handed alpha
Helix 2
AA2
A
53 62Right-handed alpha
Helix 3
AA3
A
75 78Right-handed 310
Helix 4
AA4
A
79 86Right-handed alpha
Helix 5
AA5
A
121 128Right-handed alpha
Helix 6
AA6
A
150 156Right-handed alpha
Helix 7
AA7
A
159 171Right-handed alpha
Helix 8
AA8
A
192 197Right-handed alpha
Helix 9
AA9
A
236 254Right-handed alpha
Helix 10
AB1
A
286 299Right-handed alpha
Helix 11
AB2
A
300 302Right-handed 310
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There are 3 sheets in PDB entry 6AHV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 21first strand
Strand 2
A
348 355anti-parallel
Strand 3
A
338 344anti-parallel
Strand 4
A
309 316anti-parallel
Strand 5
A
39 47anti-parallel
Strand 6
A
270 285anti-parallel
Strand 7
A
208 220anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
141 149anti-parallel
Strand 3
A
114 120anti-parallel
Strand 4
A
106 109anti-parallel
Strand 5
A
90 96anti-parallel
Strand 6
A
176 185anti-parallel
Strand 7
A
66 73anti-parallel
Strand 8
A
203 205anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 326first strand
Strand 2
A
332 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il