Analysis of interatomic Contacts of Structural Units in PDB entry:
6AKI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AKI entry

There are 10 chains in PDB entry 6AKI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 150HIS 330
B
 LYS 150HIS 330
C
 LYS 150HIS 330
D
 LYS 150HIS 330
E
 LYS 150HIS 330
F
 LYS 150HIS 330
O
 LYS 150HIS 330
P
 LYS 150HIS 330
Q
 LYS 150HIS 330
R
 LYS 150ALA 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 48 helices in PDB entry 6AKI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
150 177Right-handed alpha
Helix 2
AA2
A
193 216Right-handed alpha
Helix 3
AA3
A
243 271Right-handed alpha
Helix 4
AA4
A
277 328Right-handed alpha
Helix 5
AA5
B
151 177Right-handed alpha
Helix 6
AA6
B
194 216Right-handed alpha
Helix 7
AA7
B
242 271Right-handed alpha
Helix 8
AA8
B
277 329Right-handed alpha
Helix 9
AA9
C
151 177Right-handed alpha
Helix 10
AB1
C
193 216Right-handed alpha
Helix 11
AB2
C
242 271Right-handed alpha
Helix 12
AB3
C
277 329Right-handed alpha
Helix 13
AB4
D
151 177Right-handed alpha
Helix 14
AB5
D
193 216Right-handed alpha
Helix 15
AB6
D
242 271Right-handed alpha
Helix 16
AB7
D
277 329Right-handed alpha
Helix 17
AB8
E
151 177Right-handed alpha
Helix 18
AB9
E
193 216Right-handed alpha
Helix 19
AC1
E
242 271Right-handed alpha
Helix 20
AC2
E
277 328Right-handed alpha
Helix 21
AC3
F
151 177Right-handed alpha
Helix 22
AC4
F
193 216Right-handed alpha
Helix 23
AC5
F
242 271Right-handed alpha
Helix 24
AC6
F
276 329Right-handed alpha
Helix 25
AC7
O
151 177Right-handed alpha
Helix 26
AC8
O
193 216Right-handed alpha
Helix 27
AC9
O
242 271Right-handed alpha
Helix 28
AD1
O
277 329Right-handed alpha
Helix 29
AD2
P
151 177Right-handed alpha
Helix 30
AD3
P
193 216Right-handed alpha
Helix 31
AD4
P
242 271Right-handed alpha
Helix 32
AD5
P
276 328Right-handed alpha
Helix 33
AD6
Q
151 177Right-handed alpha
Helix 34
AD7
Q
193 216Right-handed alpha
Helix 35
AD8
Q
243 271Right-handed alpha
Helix 36
AD9
Q
277 329Right-handed alpha
Helix 37
AE1
R
151 177Right-handed alpha
Helix 38
AE2
R
194 216Right-handed alpha
Helix 39
AE3
R
242 271Right-handed alpha
Helix 40
AE4
R
277 329Right-handed alpha
Helix 41
AE5
S
151 177Right-handed alpha
Helix 42
AE6
S
194 216Right-handed alpha
Helix 43
AE7
S
242 271Right-handed alpha
Helix 44
AE8
S
277 328Right-handed alpha
Helix 45
AE9
T
151 177Right-handed alpha
Helix 46
AF1
T
194 216Right-handed alpha
Helix 47
AF2
T
242 271Right-handed alpha
Helix 48
AF3
T
277 329Right-handed alpha
Back to top of page
There are no sheets in PDB entry 6AKI
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il