Analysis of interatomic Contacts of Structural Units in PDB entry:
6ALD


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ALD entry

There are 4 chains in PDB entry 6ALD (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 2PRO 344
B
 HIS 2PRO 344
C
 HIS 2PRO 344
D
 HIS 2PRO 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6ALD. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 22Right-handed alpha
Helix 2
2
A
36 45Right-handed alpha
Helix 3
3
A
52 63Right-handed alpha
Helix 4
4
A
67 72Right-handed 310
Helix 5
5
A
80 84Right-handed alpha
Helix 6
6
A
93 100Right-handed alpha
Helix 7
7
A
130 139Right-handed alpha
Helix 8
8
A
160 180Right-handed alpha
Helix 9
9
A
198 218Right-handed alpha
Helix 10
10
A
223 225Right-handed 310
Helix 11
11
A
245 257Right-handed alpha
Helix 12
12
A
276 288Right-handed alpha
Helix 13
13
A
303 313Right-handed alpha
Helix 14
14
A
317 339Right-handed 310
Helix 15
15
B
9 22Right-handed alpha
Helix 16
16
B
36 45Right-handed alpha
Helix 17
17
B
52 63Right-handed alpha
Helix 18
18
B
67 72Right-handed 310
Helix 19
19
B
80 84Right-handed alpha
Helix 20
20
B
93 100Right-handed alpha
Helix 21
21
B
130 139Right-handed alpha
Helix 22
22
B
160 180Right-handed alpha
Helix 23
23
B
198 218Right-handed alpha
Helix 24
24
B
223 225Right-handed 310
Helix 25
25
B
245 257Right-handed alpha
Helix 26
26
B
276 288Right-handed alpha
Helix 27
27
B
303 313Right-handed alpha
Helix 28
28
B
317 339Right-handed 310
Helix 29
29
C
9 22Right-handed alpha
Helix 30
30
C
36 45Right-handed alpha
Helix 31
31
C
52 63Right-handed alpha
Helix 32
32
C
67 72Right-handed 310
Helix 33
33
C
80 84Right-handed alpha
Helix 34
34
C
93 100Right-handed alpha
Helix 35
35
C
130 139Right-handed alpha
Helix 36
36
C
160 180Right-handed alpha
Helix 37
37
C
198 218Right-handed alpha
Helix 38
38
C
223 225Right-handed 310
Helix 39
39
C
245 257Right-handed alpha
Helix 40
40
C
276 288Right-handed alpha
Helix 41
41
C
303 313Right-handed alpha
Helix 42
42
C
317 339Right-handed 310
Helix 43
43
D
9 22Right-handed alpha
Helix 44
44
D
36 45Right-handed alpha
Helix 45
45
D
52 63Right-handed alpha
Helix 46
46
D
67 72Right-handed 310
Helix 47
47
D
80 84Right-handed alpha
Helix 48
48
D
93 100Right-handed alpha
Helix 49
49
D
130 139Right-handed alpha
Helix 50
50
D
160 180Right-handed alpha
Helix 51
51
D
198 218Right-handed alpha
Helix 52
52
D
223 225Right-handed 310
Helix 53
53
D
245 257Right-handed alpha
Helix 54
54
D
276 288Right-handed alpha
Helix 55
55
D
303 313Right-handed alpha
Helix 56
56
D
317 339Right-handed 310
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There are 12 sheets in PDB entry 6ALD. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 228first strand
Strand 2
A
183 191parallel
Strand 3
A
144 152parallel
Strand 4
A
103 107parallel
Strand 5
A
73 78parallel
Strand 6
A
28 32parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
122 124anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 269first strand
Strand 2
A
296 299parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
226 228first strand
Strand 2
B
183 191parallel
Strand 3
B
144 152parallel
Strand 4
B
103 107parallel
Strand 5
B
73 78parallel
Strand 6
B
28 32parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
122 124anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
266 269first strand
Strand 2
B
296 299parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
226 228first strand
Strand 2
C
183 191parallel
Strand 3
C
144 152parallel
Strand 4
C
103 107parallel
Strand 5
C
73 78parallel
Strand 6
C
28 32parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 114first strand
Strand 2
C
122 124anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
266 269first strand
Strand 2
C
296 299parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
226 228first strand
Strand 2
D
183 191parallel
Strand 3
D
144 152parallel
Strand 4
D
103 107parallel
Strand 5
D
73 78parallel
Strand 6
D
28 32parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 114first strand
Strand 2
D
122 124anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
266 269first strand
Strand 2
D
296 299parallel
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