Analysis of interatomic Contacts of Structural Units in PDB entry:
6ALL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ALL entry

There are 2 chains in PDB entry 6ALL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 37ALA 322
B
 ALA 36LYS 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6ALL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 68Right-handed alpha
Helix 2
AA2
A
79 86Right-handed alpha
Helix 3
AA3
A
106 112Right-handed alpha
Helix 4
AA4
A
122 126Right-handed alpha
Helix 5
AA5
A
128 134Right-handed alpha
Helix 6
AA6
A
149 166Right-handed alpha
Helix 7
AA7
A
167 192Right-handed alpha
Helix 8
AA8
A
220 228Right-handed alpha
Helix 9
AA9
A
249 257Right-handed 310
Helix 10
AB1
A
268 273Right-handed alpha
Helix 11
AB2
A
285 290Right-handed alpha
Helix 12
AB3
A
305 322Right-handed alpha
Helix 13
AB4
B
59 69Right-handed alpha
Helix 14
AB5
B
78 86Right-handed alpha
Helix 15
AB6
B
106 112Right-handed alpha
Helix 16
AB7
B
125 127Right-handed 310
Helix 17
AB8
B
128 134Right-handed alpha
Helix 18
AB9
B
149 166Right-handed alpha
Helix 19
AC1
B
167 192Right-handed alpha
Helix 20
AC2
B
220 229Right-handed alpha
Helix 21
AC3
B
251 257Right-handed 310
Helix 22
AC4
B
268 275Right-handed alpha
Helix 23
AC5
B
279 284Right-handed alpha
Helix 24
AC6
B
285 290Right-handed alpha
Helix 25
AC7
B
305 321Right-handed alpha
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There are 8 sheets in PDB entry 6ALL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
44 47anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
75 76parallel
Strand 3
A
55 57parallel
Strand 4
A
117 121parallel
Strand 5
A
138 141parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
198 207parallel
Strand 3
A
210 216anti-parallel
Strand 4
A
245 248anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
A
198 207parallel
Strand 3
A
260 265parallel
Strand 4
A
293 295parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 41first strand
Strand 2
B
44 48anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
75 77parallel
Strand 3
B
55 57parallel
Strand 4
B
117 121parallel
Strand 5
B
138 141parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
198 206parallel
Strand 3
B
211 216anti-parallel
Strand 4
B
245 249anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 233first strand
Strand 2
B
198 206parallel
Strand 3
B
260 265parallel
Strand 4
B
293 295parallel
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