Analysis of interatomic Contacts of Structural Units in PDB entry:
6AMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AMN entry

There is 1 chain in PDB entry 6AMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4LEU 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6AMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 25Right-handed alpha
Helix 2
AA2
A
31 40Right-handed alpha
Helix 3
AA3
A
49 58Right-handed alpha
Helix 4
AA4
A
61 75Right-handed alpha
Helix 5
AA5
A
89 106Right-handed alpha
Helix 6
AA6
A
112 121Right-handed alpha
Helix 7
AA7
A
123 133Right-handed alpha
Helix 8
AA8
A
136 149Right-handed alpha
Helix 9
AA9
A
165 170Right-handed alpha
Helix 10
AB1
A
174 180Right-handed alpha
Helix 11
AB2
A
189 202Right-handed alpha
Helix 12
AB3
A
217 231Right-handed alpha
Helix 13
AB4
A
235 239Right-handed 310
Helix 14
AB5
A
247 253Right-handed alpha
Helix 15
AB6
A
259 274Right-handed alpha
Helix 16
AB7
A
286 291Right-handed alpha
Helix 17
AB8
A
294 308Right-handed alpha
Helix 18
AB9
A
317 326Right-handed alpha
Helix 19
AC1
A
328 333Right-handed alpha
Helix 20
AC2
A
342 352Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6AMN.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
242 246anti-parallel
Strand 3
A
279 284parallel
Strand 4
A
310 316parallel
Strand 5
A
207 211parallel
Strand 6
A
335 339parallel
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