Analysis of interatomic Contacts of Structural Units in PDB entry:
6AN5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AN5 entry

There are 2 chains in PDB entry 6AN5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2LYS 236
B
 ILE 2HIS 239
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 6AN5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 58Right-handed 310
Helix 2
AA2
A
59 69Right-handed alpha
Helix 3
AA3
A
99 111Right-handed alpha
Helix 4
AA4
A
114 130Right-handed alpha
Helix 5
AA5
A
138 142Right-handed 310
Helix 6
AA6
A
143 158Right-handed alpha
Helix 7
AA7
A
175 190Right-handed alpha
Helix 8
AA8
A
200 208Right-handed alpha
Helix 9
AA9
A
224 236Right-handed alpha
Helix 10
AB1
B
16 26Right-handed alpha
Helix 11
AB2
B
55 58Right-handed 310
Helix 12
AB3
B
59 69Right-handed alpha
Helix 13
AB4
B
99 111Right-handed alpha
Helix 14
AB5
B
114 130Right-handed alpha
Helix 15
AB6
B
138 142Right-handed 310
Helix 16
AB7
B
143 158Right-handed alpha
Helix 17
AB8
B
173 190Right-handed alpha
Helix 18
AB9
B
200 208Right-handed alpha
Helix 19
AC1
B
224 238Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 6AN5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 43first strand
Strand 2
A
3 9anti-parallel
Strand 3
A
75 79anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
162 166parallel
Strand 3
A
193 197parallel
Strand 4
A
48 53parallel
Strand 5
A
210 215parallel
Strand 6
A
218 223anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 43first strand
Strand 2
B
3 12anti-parallel
Strand 3
B
75 79anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
162 166parallel
Strand 3
B
193 197parallel
Strand 4
B
49 53parallel
Strand 5
B
210 215parallel
Strand 6
B
218 223anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il