Analysis of interatomic Contacts of Structural Units in PDB entry:
6ANK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ANK entry

There are 2 chains in PDB entry 6ANK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 135LYS 402
B
 ASN 135ALA 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6ANK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
210 215Right-handed alpha
Helix 2
AA2
A
243 245Right-handed 310
Helix 3
AA3
A
342 346Right-handed 310
Helix 4
AA4
A
377 390Right-handed alpha
Helix 5
AA5
B
210 215Right-handed alpha
Helix 6
AA6
B
243 245Right-handed 310
Helix 7
AA7
B
342 347Right-handed 310
Helix 8
AA8
B
377 390Right-handed alpha
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There are 8 sheets in PDB entry 6ANK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 207first strand
Strand 2
A
151 160anti-parallel
Strand 3
A
138 146anti-parallel
Strand 4
A
251 256anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 188first strand
Strand 2
A
173 180anti-parallel
Strand 3
A
218 225anti-parallel
Strand 4
A
233 241anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 340first strand
Strand 2
A
282 291anti-parallel
Strand 3
A
269 277anti-parallel
Strand 4
A
395 400anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 321first strand
Strand 2
A
304 312anti-parallel
Strand 3
A
349 357anti-parallel
Strand 4
A
365 372anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 206first strand
Strand 2
B
151 160anti-parallel
Strand 3
B
138 146anti-parallel
Strand 4
B
251 256anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 188first strand
Strand 2
B
173 180anti-parallel
Strand 3
B
218 225anti-parallel
Strand 4
B
233 241anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 340first strand
Strand 2
B
282 291anti-parallel
Strand 3
B
269 277anti-parallel
Strand 4
B
395 400anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
315 321first strand
Strand 2
B
304 312anti-parallel
Strand 3
B
349 357anti-parallel
Strand 4
B
365 372anti-parallel
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