Analysis of interatomic Contacts of Structural Units in PDB entry:
6AO5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AO5 entry

There are 2 chains in PDB entry 6AO5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 28GLN 488
B
 SER 291ALA 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6AO5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 75Right-handed alpha
Helix 2
AA2
A
106 115Right-handed alpha
Helix 3
AA3
A
119 140Right-handed alpha
Helix 4
AA4
A
148 150Right-handed 310
Helix 5
AA5
A
189 194Right-handed alpha
Helix 6
AA6
A
201 217Right-handed alpha
Helix 7
AA7
A
225 236Right-handed alpha
Helix 8
AA8
A
243 247Right-handed 310
Helix 9
AA9
A
248 259Right-handed alpha
Helix 10
AB1
A
262 266Right-handed 310
Helix 11
AB2
A
268 273Right-handed alpha
Helix 12
AB3
A
275 280Right-handed alpha
Helix 13
AB4
A
283 286Right-handed 310
Helix 14
AB5
A
287 308Right-handed alpha
Helix 15
AB6
A
311 430Right-handed 310
Helix 16
AB7
A
437 443Right-handed 310
Helix 17
AB8
A
444 488Right-handed alpha
Helix 18
AB9
B
297 301Right-handed 310
Helix 19
AC1
B
305 314Right-handed alpha
Helix 20
AC2
B
328 376Right-handed alpha
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There are 2 sheets in PDB entry 6AO5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
41 44anti-parallel
Strand 3
A
53 56anti-parallel
Strand 4
A
96 100anti-parallel
Strand 5
A
85 89anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
160 162anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il